Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02128 ATGTTTCTTATGAATTTGGAAGGAGGTGTAAGTTTGCAACTAAGCAACGATGTACAGTACTTTCATGAGGATGAAGAACTCCAACTCCCTCCTCCACTCAAGGAGTTTGCATCGCCCAGTCTATTTGATGGGTTTATACTGAATTCATCTTCCTTACCATCAGAAGAAGCAGCATTAGCAGAAGAATTACTATTACCTGCAGCAGTAGCAGTACCTTCATCAGACTTCATGGTTCCTGAAGTTGTACGCAATGGTTTTTGTGTGGGAATTAATAATGAGAGTGAGAAGAAGGACAGCGAGAGAACTATTTCTGCACAGAGCATAGCCGCAAGGGAGAGAAGAAGGAAGATCACAGAGAAGACACAAGAGCTTGGAAAGTTGGTTCCTGGTGGACCAAAGATGAACACAGCTGAGATGCTCCATGCAGCTTCTAGATATGTGAAGTACCTTCAAACTCAAGTTGGTATGCTCCAACTAATGAACACAATTCAGAAAGAAGATGAGGTTGCTCCTCCAAGTGAAGATCTATGTGCTCTTGTTACTTCTCCCTTTGTTCAAGAGAAGCTTTATTCTGAGGAACTATGCTTTGTCCCTAAAGACTTTGTTACAACTTTGACAAATCAGCGTGATGTTCGATCAAAGCCTACCATCCTTAAGGATCTTAAAGAGTTGATTGAAACAAACAATTTGCAGAAGAAAGCATAG 705 0.4113 MFLMNLEGGVSLQLSNDVQYFHEDEELQLPPPLKEFASPSLFDGFILNSSSLPSEEAALAEELLLPAAVAVPSSDFMVPEVVRNGFCVGINNESEKKDSERTISAQSIAARERRRKITEKTQELGKLVPGGPKMNTAEMLHAASRYVKYLQTQVGMLQLMNTIQKEDEVAPPSEDLCALVTSPFVQEKLYSEELCFVPKDFVTTLTNQRDVRSKPTILKDLKELIETNNLQKKA 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02128 234 Gene3D - 98 170 IPR036638 GO:0046983
Adu07g02128 234 Pfam Helix-loop-helix DNA-binding domain 107 151 IPR011598 GO:0046983
Adu07g02128 234 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 99 162 IPR036638 GO:0046983
Adu07g02128 234 PANTHER TRANSCRIPTION FACTOR BHLH52-RELATED 40 222 - -
Adu07g02128 234 SMART finulus 107 156 IPR011598 GO:0046983
Adu07g02128 234 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 101 150 IPR011598 GO:0046983
Adu07g02128 234 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 40 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02128 Adu-Chr7 70529865 70533408 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02128 74 228 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 44.516 6.15e-32 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu07g02128 HLH 1.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02128 - - aip:107610272 350.132