Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02107 ATGCTTTCTGGAAGACATAACTTGGGTTTCCAACGTTCTGTTTATGAGATTAAGTCCATCACGCTTGCCGAAATTGAAAAACTCTTGCAGCCGAATGGTAGGAGCATAAAAGAATTTACTGACATGCCGTTTCCTGATTATGCTGGTTTACCTGAACCTTCCGACACAGTCTTTTCTGATGAGCTCAATTTCGACAGGACAGAATTGGCAAGTATCTCCGTGGATTTGGCTTCCCGGTTGAATCGAGACCAGCGCATTGCGTTCGACACAATAGCAAATACAGTTCGTCGTGACGCTGGTggttttttctttgtctgtggatatggtggaactgATATCCACGGTGTACAATTGAAGGAATTTGCTACATGGTTGCTTCAAATTGGTGACGGGTTAATCGGAGACAGCACCTATGGCGAATCAGTAATTAGAATACCCGACAACTTGCTGCTGAATATTGAGTCTCCATGTATGCATGATTTGGTGTTGTTTGTTTATCCTGACATCTTACTCTATTCTTCTAGCGTGGATTATTTTAAGGGTAGGAGTATATTAGCACCAACACTTGATGTTGTAACTGAAGTAAACAATCATGTGATGTCTTTTATCCCTGGCAACGAGAGGGTTTACTTGAGCTCTGATACACTAATTAATGAAGATGGTCACCTGGAATCTGAATTATACACAACGAGCACCGAGTCATTGAATGCGCTAAATTGTTCAGGAATTCTCCAACACCGGTTAGTTCTTAAAATCGGTGTTCCTGTGATGCTTCTTCACAATATTGACCAATCCAATGGACTATGCAATGGTACGCGAATGCAGGTTAGACGTCTTGGTGACCACATCATTGAGTGCGTCATCTTAGCAgGGCTCATGCGATGTGGGAAAAGTTGCCGTTTGAGATGGATCAATTATTTGAGGCCAGATGTTAAGAGAGGCAATTTTACAGCAGAGGAAGAGGAAACCATAATAAAGCTTCATAAAGCCATGGGGAACAAATGGTCTAAGATTGCATCCCGTTTGCCCGGTCGAACAGACAACGAGATAAAAAATGTGTGGAACACCCACTTGAAGAAGAGATTAACTGCTGCAAAATCTTCAGATTCAAGGGAAGATAATGCAAATGATGGATCTAAAATTGAATCATCAGTGACTTCACCCTCTTCATCTTCATCTGAATCATTTTTCTCAAATGAAACACCAAAAACTAACAACAACAATCCTTGCAATGAAACCAATGACCATATTTCCCAAACTGATGATGATGATCAAGATTCAGGTGGGAAGTTATTACAAGAAGTAATTGGTATCACTGAAGAGACAAAAGGGTCATCAAATTCATCATCATCAACATCATTATCATCTTGTATTGAATACAAGAAGCATGATGAAGATCAACAACAATTGGTGTCTCCAACATTTTTGAACTGTGTTGCACCCTATGATATTGATGTTACATTGGAAGAGGTTGATAAGCCAAACAACAATAATTTGGAGACAAAAGAAGATTGTGATTTTTGGAAAATGTTAGATAATATTGAATCATTTCTATCATCAAATGAGGCATCTCCTCCTCCTCCTCCTCCTCATCAAAGCCAAACATCACCAACAAATCTTGTTCATCAAGATGATGATGAAGCCATGATGATGATGATGTGGTCCCATGAATTTGAGAACGAGCTTGGAGGAGTGGTAGGTGAAGCAACAACAAAAGGGTCAAATAACAAGGCTCAACAAGAAATAATAATGGACCCATCAAATGATGTATTTGATTTAGATCTTGTGACAAGGCCACCAGAACCCGATCAATTAGAATCAGAATTAGACTTGGGATATATTCAATTGTGGCCCTCTTTGCCACCAAATACTATTCTCTAA 1881 0.3886 MLSGRHNLGFQRSVYEIKSITLAEIEKLLQPNGRSIKEFTDMPFPDYAGLPEPSDTVFSDELNFDRTELASISVDLASRLNRDQRIAFDTIANTVRRDAGGFFFVCGYGGTDIHGVQLKEFATWLLQIGDGLIGDSTYGESVIRIPDNLLLNIESPCMHDLVLFVYPDILLYSSSVDYFKGRSILAPTLDVVTEVNNHVMSFIPGNERVYLSSDTLINEDGHLESELYTTSTESLNALNCSGILQHRLVLKIGVPVMLLHNIDQSNGLCNGTRMQVRRLGDHIIECVILAGLMRCGKSCRLRWINYLRPDVKRGNFTAEEEETIIKLHKAMGNKWSKIASRLPGRTDNEIKNVWNTHLKKRLTAAKSSDSREDNANDGSKIESSVTSPSSSSSESFFSNETPKTNNNNPCNETNDHISQTDDDDQDSGGKLLQEVIGITEETKGSSNSSSSTSLSSCIEYKKHDEDQQQLVSPTFLNCVAPYDIDVTLEEVDKPNNNNLETKEDCDFWKMLDNIESFLSSNEASPPPPPPHQSQTSPTNLVHQDDDEAMMMMMWSHEFENELGGVVGEATTKGSNNKAQQEIIMDPSNDVFDLDLVTRPPEPDQLESELDLGYIQLWPSLPPNTIL 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02107 626 Gene3D - 275 312 - -
Adu07g02107 626 MobiDBLite consensus disorder prediction 379 415 - -
Adu07g02107 626 MobiDBLite consensus disorder prediction 363 378 - -
Adu07g02107 626 CDD SANT 315 358 IPR001005 -
Adu07g02107 626 PANTHER MYB-RELATED PROTEIN 290 521 - -
Adu07g02107 626 Pfam Myb-like DNA-binding domain 313 358 IPR001005 -
Adu07g02107 626 SUPERFAMILY Homeodomain-like 294 366 IPR009057 -
Adu07g02107 626 Gene3D - 315 383 - -
Adu07g02107 626 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 290 521 - -
Adu07g02107 626 MobiDBLite consensus disorder prediction 363 428 - -
Adu07g02107 626 SMART sant 312 360 IPR001005 -
Adu07g02107 626 MobiDBLite consensus disorder prediction 518 540 - -
Adu07g02107 626 Pfam PIF1-like helicase 117 279 IPR010285 GO:0000723|GO:0003678|GO:0006281
Adu07g02107 626 ProSiteProfiles Myb-like domain profile. 308 358 IPR001005 -
Adu07g02107 626 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 308 362 IPR017930 -
Adu07g02107 626 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 290 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02107 Adu-Chr7 69929639 69941364 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02107 291 520 MYB Transcription Factor Family AT1G79180 42.174 9.25e-41 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu07g02107 PIF1 7.9e-46 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02107 K09422 - ahf:112763942 335.88