Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02084 ATGTCTGTGATAGCTCACGTCGATCACGGAAAATCAACTCTCACTGATTCTCTGGTTGCTGCCGCTGGAATTATTGCCCAAGAAGTGGCAGGGGATGTCCGTATGACTGATACCCGAGCAGATGAAGCTGAGCGTGGTATTACAATAAAGTCTACTGGTATCTCTCTCTACTATGAAATGAGTGATGAGGCCCTCAAGAATTACAAGGGAGAACGCCAAGGAAATGAGTATCTCATAAATCTCATCGATTCACCCGGGCACGTTGATTTCTCATCGGAGGTTACTGCTGCGCTCCGTATTACTGATGGAGCACTAGTGGTGGTGGATTGTATTGAAGGTGTCTGTGTGCAAACTGAAACTGTGCTACGACAGGCTCTTGGAGAAAGGATCAGACCTGTTCTGACTGTAAACAAGATGGACAGATGCTTCCTGGAGCTCCAGGTTGATGGAGAGGAGGCTTACCAAACATTCTCAAGAGTTATTGAGAATGCCAATGTGATCATGGCTACATATGAGGATCCGTTGCTTGGTGATTGCCAGGTGTACCCAGAGAAAGGAACGGTTGCTTTCTCTGCTGGTTTGCACGGTTGGGCTTTTACCTTGACAAACTTCGCAAAAATGTATGCCTCAAAATTCGGCGTTGATGAATCAAAGATGATGGAAAGGCTCTGGGGTGAAAACTTCTTTGATCCTGCGACAAAGAAATGGACCAGCAAGAACACCGGTACTGCCACATGCAAGCGTGGGTTTGTACAGTTCTGTTATGAGCCCATCAAGCAGATCATCAACACTTGTATGAATGATCAGAAGGATAAGCTCTGGCCTATGTTGCAGAAGTTAGCAGTCACCATGAAATCTGATGAAAAGGACTTGATGGGCAAAGCATTGATGAAACGTGTCATGCAAACATGGCTTCCAGCAAGTACTGCACTCTTGGAAATGATGATATTTCATCTTCCATCTCCAGCTAAGGCCCAAAAGTATCGTGTTGAGAATTTGTATGAGGGTCCCCTCGATGATCAATATGCTGCTGCTATTAGAGCCTGTGATCCTGAGGGTCCACTTATGCTTTATGTCTCTAAGATGATTCCTGCTTCTGACAAGGGTCGGTTCTTTGCTTTTGGTCGTGTTTTCTCTGGGAGAGTGTCAACTGGTCTGAAGGTCAGAATTATGGGACCAAATTATGTTCCTGGTGAGAAGAAAGACCTGTATGTTAAAAGTGTGCAAAGGACCGTCATTTGGATGGGAAAGAGGCAAGAAACAGTGGAGGATGTTCCTTGTGGTAACACAGTTGCCATGGTTGGTTTGGATCAATTTATCACCAAGAATGCCACATTGACAAATGAGAAGGAAGTTGATGCCCACCCGATTCGAGCCATGAAGTTTTCTGTCTCACCTGTCGTGCGTGTTGCTGTTCAGTGTAAGGTTGCATCTGATCTTCCTAAGCTTGTTGAGGGTCTCAAGAGGTTGGCCAAATCTGATCCTATGGTTCTCTGTACTATTGAGGAATCTGGAGAGCACATTGTTGCTGGTGCTGGGGAGCTTCACTTGGAAATTTGCTTGAAGGACTTGCAAGAAGATTTCATGGGAGGAGCTGAGATTATCAAATCTGACCCTGTTGTGTCTTTCCGCGAGACTGTTCTTGAGAGGTCATGCCGCACTGTGATGAGCAAGTCACCCAACAAGCACAACCGTCTCTACATGGAAGCTAGGCCAATGGAGGATGGTCTTGCAGAGGCCATTGATGATGGCAAGATTGGTCCGAGGGATGACCCCAAAGTTCGTTCCAAGATCTTGTCTGAAGAGTACGGTTGGGACAAGGATCTTGCCAAGAAAATCTGGTGTTTTGGCCCCGAGACAACTGGACCCAACATGGTTGTTGATATGTGTAAGGGAGTCCAGTACTTGAATGAAATCAAGGACTCTGTGGTTGCTGGTTTCCAATGGGCATCAAAGGAAGGTGCTCTTGCTGAAGAAAACATGAGAGCTATCTGCTTCGAAGTCTGCGATGTAGTCCTCCACGCTGATGCTATCCACAGAGGTGGTGGTCAGATTATCCCCACTGCCAGGAGAGTCTTCTATGCTTCCCAGTTGACTGCCAAGCCCAGGCTTCTTGAGCCTGTCTACTTGGTTGAAATCCAAGCTCCTGAGCAGGCTCTTGGTGGTATTTACAGTGTTCTGAACCAGAAGCGTGGACACGTGTTTGAGGAAATGCAGAGGCCCGGGACTCCACTCTACAACATCAAGGCTTACCTCCCTGTCATTGAGTCCTTTGGATTCTCCAGCACCTTGAGAGCCGCAACTTCCGAGGAAAGGTTTGAAGGAGCAAATGACGCCTCTATCCGAGTACGAGGACAAGCTTTAAATTGTTTCCTGCTGTTCTATTTTATGGTATTAGGGAAACAAATATTTGAGACAATCTCTGTAAAGCGCAGAATATGTTTAGAGGGGGAAATAGTGGAGCTGATTTTTGTCAGCAATTGTCCCCCTAAGCCACGGCTTGATGGTGAAGCCAAATGCGGCTCATCCCTCTGTGTTGGCCTCCGTAACGGGCAAATTGatgagtga 2568 0.4653 MSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMSDEALKNYKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVIENANVIMATYEDPLLGDCQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTSKNTGTATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLAVTMKSDEKDLMGKALMKRVMQTWLPASTALLEMMIFHLPSPAKAQKYRVENLYEGPLDDQYAAAIRACDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGRVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKRQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIVAGAGELHLEICLKDLQEDFMGGAEIIKSDPVVSFRETVLERSCRTVMSKSPNKHNRLYMEARPMEDGLAEAIDDGKIGPRDDPKVRSKILSEEYGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRAICFEVCDVVLHADAIHRGGGQIIPTARRVFYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSEERFEGANDASIRVRGQALNCFLLFYFMVLGKQIFETISVKRRICLEGEIVELIFVSNCPPKPRLDGEAKCGSSLCVGLRNGQIDE 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02084 855 Gene3D - 549 698 IPR014721 -
Adu07g02084 855 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 37 52 IPR031157 -
Adu07g02084 855 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 320 IPR027417 -
Adu07g02084 855 SUPERFAMILY Translation proteins 321 455 IPR009000 -
Adu07g02084 855 Pfam Elongation factor G C-terminus 703 769 IPR000640 -
Adu07g02084 855 Gene3D - 699 773 - -
Adu07g02084 855 Pfam Elongation factor Tu GTP binding domain 1 321 IPR000795 GO:0003924|GO:0005525
Adu07g02084 855 TIGRFAM small_GTP: small GTP-binding protein domain 3 155 IPR005225 GO:0005525
Adu07g02084 855 Gene3D - 1 187 IPR027417 -
Adu07g02084 855 CDD aeEF2_snRNP_like_IV 538 710 - -
Adu07g02084 855 SMART EFG_IV_2 584 701 IPR005517 GO:0005525
Adu07g02084 855 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1 323 IPR000795 GO:0003924|GO:0005525
Adu07g02084 855 PANTHER - 1 773 - -
Adu07g02084 855 SUPERFAMILY Ribosomal protein S5 domain 2-like 541 705 IPR020568 -
Adu07g02084 855 PRINTS GTP-binding elongation factor signature 132 141 IPR000795 GO:0003924|GO:0005525
Adu07g02084 855 PRINTS GTP-binding elongation factor signature 44 52 IPR000795 GO:0003924|GO:0005525
Adu07g02084 855 PRINTS GTP-binding elongation factor signature 80 90 IPR000795 GO:0003924|GO:0005525
Adu07g02084 855 PRINTS GTP-binding elongation factor signature 96 107 IPR000795 GO:0003924|GO:0005525
Adu07g02084 855 Gene3D Translation factors 322 463 - -
Adu07g02084 855 CDD EF2_snRNP_III 466 538 - -
Adu07g02084 855 SMART EFG_C_a 703 807 IPR000640 -
Adu07g02084 855 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 773 - -
Adu07g02084 855 Pfam Elongation factor G, domain IV 589 701 IPR005517 GO:0005525
Adu07g02084 855 Gene3D Yeast translation eEF2 (G' domain) 201 305 - -
Adu07g02084 855 SUPERFAMILY EF-G C-terminal domain-like 706 769 IPR035647 -
Adu07g02084 855 Pfam Elongation factor Tu domain 2 373 446 IPR004161 GO:0005525
Adu07g02084 855 CDD EF2 1 209 - -
Adu07g02084 855 CDD eEF2_snRNP_like_C 706 769 - -
Adu07g02084 855 Pfam Elongation Factor G, domain III 466 528 IPR041095 -
Adu07g02084 855 CDD EF2_II 354 449 - -
Adu07g02084 855 SUPERFAMILY EF-G C-terminal domain-like 463 539 IPR035647 -
Adu07g02084 855 Gene3D Elongation Factor G (Translational Gtpase), domain 3 464 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02084 Adu-Chr7 67652944 67658776 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02084 1 773 Eukaryotic Initiation Factors Gene Family AT1G56070 92.626 0.0 1508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02084 K03234 - tcc:18594569 1510.74