Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02054 ATGGAAGAGGTGTTGAATTCGATTAGCCATGGTTGCGAATTAGCGAAGAAAATAGAATCGGAGCAACTAGCAAATATGGCGAATATCCAACCTGATATATTGGTTTCTTCTATTGATGAAGTTGTGAAGGCATTCAATGGTGCAAAGGAGAAGCTGTTGATGACTATGGTGAATAACAATTCTTCTTCTTCTTCTTCTTCATTTGCTCAACAACAAATGGGTGCATGCGGGGCAAGTTCTTTCTCAATTATGATGCAAGAATGGATGATGAAGTCTTCTTCTTCTACAAGCTATGCTGCACAGACAACAATGGATCAGGTTTTGTTGCAAATGCAAGGATTCCCTGCTGGCGGCGGGGATCTTCAGCAGTTAAGAAATGTTGAAGGATCATCATCTATGGACAAATCAATGAAAGGCCTTGAGGTACATCAACTATCACCTTCAAGGCCACGGAAAAGGAAGAATGATGCGGAGAAGAGAGTAGTGAATCTTCCAGCTCAACAACTTGGAAACACAGAAATGCCTATGGAAGATGGATTCACTTGGAGAAAATATGGTCAGAAAGAGATACTTGGTTCTAAGTATCAAAGGAGTTATTACAGGTGCACCCACCAGAAACAATATGGATGCCCAGCAAAGAAACAAGTGCAGAAAATTGATAACAATCCAAACATATTTGAAGTAACATACGTTGGGGATCACACATGCCACATGTCATCAACAGCACCATCATCATTTCCACAGCAACTTCAACTTGATAACATTAACATAATGCCTCCCAATAATCCTCTTCAAGGAGCAGGAGGACCTAACACTTCCTCTCCTTCTTCTTCTATGTGGATGCACTCAGTTAGCCTCAGTCTCGGCGGCGGCGGCGATGGCAGCAGCAGCGCTGGTGCTGGACCCTCTACTTTGAAATACGGTGTCGGCGGTGCTGATTATCTGGTGGCGGATATGGCTGATGTTATGTTTAATTCTGGGAGTAGCAGTGGGAATTGCAGTATGGAATCTCTCTTCCCTACTTCTGATGATCCAAGAGCTCAAACGTCCATAAAAGTGACTTACGAGGGTTTGAGCGAGGAAAGCAAGAACATCATTGAAGTGTTGACGGCCATATTTGGGAATAGACCACTGAACTCTCGCCATGTGATGAGTGATTGGGATGCCAATCGTCAGTATTTGATATGGCAGGCGGTCTCACCCCAAGCCGAGGAAGCCGTTGACTTGAGTGTTGCTTCGGAGGCCAAGGCTGGAGGGTCTCACGAGGCAGCTGGGGCTCGGCCCAAAGACGATATTCATGAGATCATGCCCTCCTCGCCTTGA 1323 0.4505 MEEVLNSISHGCELAKKIESEQLANMANIQPDILVSSIDEVVKAFNGAKEKLLMTMVNNNSSSSSSSFAQQQMGACGASSFSIMMQEWMMKSSSSTSYAAQTTMDQVLLQMQGFPAGGGDLQQLRNVEGSSSMDKSMKGLEVHQLSPSRPRKRKNDAEKRVVNLPAQQLGNTEMPMEDGFTWRKYGQKEILGSKYQRSYYRCTHQKQYGCPAKKQVQKIDNNPNIFEVTYVGDHTCHMSSTAPSSFPQQLQLDNINIMPPNNPLQGAGGPNTSSPSSSMWMHSVSLSLGGGGDGSSSAGAGPSTLKYGVGGADYLVADMADVMFNSGSSSGNCSMESLFPTSDDPRAQTSIKVTYEGLSEESKNIIEVLTAIFGNRPLNSRHVMSDWDANRQYLIWQAVSPQAEEAVDLSVASEAKAGGSHEAAGARPKDDIHEIMPSSP 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02054 440 MobiDBLite consensus disorder prediction 129 159 - -
Adu07g02054 440 MobiDBLite consensus disorder prediction 259 280 - -
Adu07g02054 440 Gene3D WRKY domain 155 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu07g02054 440 ProSiteProfiles WRKY domain profile. 171 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu07g02054 440 PANTHER WRKY TRANSCRIPTION FACTOR 55 1 275 - -
Adu07g02054 440 MobiDBLite consensus disorder prediction 145 159 - -
Adu07g02054 440 MobiDBLite consensus disorder prediction 412 440 - -
Adu07g02054 440 Pfam WRKY DNA -binding domain 177 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu07g02054 440 SMART WRKY_cls 176 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu07g02054 440 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 275 IPR044810 GO:0003700
Adu07g02054 440 SUPERFAMILY WRKY DNA-binding domain 173 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02054 Adu-Chr7 66859363 66867887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02054 1 343 WRKY Transcription Factor Family AT2G40740 35.714 6.80e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu07g02054 WRKY 9.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02054 - - aip:107607129 563.148