Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02013 ATGAGAGGTTTTTGTTACTCAAGTAGTAGAGGTCTTGGATATCTGCACAGCAATGAAGCAAGCAAACCTACAATGGTTCACCAAAATATTTTAGTTGAAAAAGTTCTTCTTGACAATCAGTTTAACCCATTGATCATGGATGCTGGGTTCCCCAAGCTTCTAGCAGACGACATTGTTTACTCGGCACCGAAAGTTGGTGCTGCCATGGGATACCTAGCTCCTGAATACATTACCACTGGACGCATCACCGAGAAGAGTGACGTTTATGCATTCGGTGTCATTGTTCTTTAA 291 0.4227 MRGFCYSSSRGLGYLHSNEASKPTMVHQNILVEKVLLDNQFNPLIMDAGFPKLLADDIVYSAPKVGAAMGYLAPEYITTGRITEKSDVYAFGVIVL 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02013 96 Gene3D Transferase(Phosphotransferase) domain 1 1 96 - -
Adu07g02013 96 ProSiteProfiles Protein kinase domain profile. 1 96 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g02013 96 PANTHER OS01G0253100 PROTEIN 9 96 IPR045271 GO:0004714|GO:0006468
Adu07g02013 96 Pfam Protein tyrosine and serine/threonine kinase 4 95 IPR001245 GO:0004672|GO:0006468
Adu07g02013 96 SUPERFAMILY Protein kinase-like (PK-like) 4 95 IPR011009 -
Adu07g02013 96 PANTHER LEUCINE RICH REPEAT RECEPTOR KINASE 9 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02013 Adu-Chr7 65185589 65186240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02013 2 96 Receptor kinase-like Gene Family AT1G53420 43.158 1.51e-22 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Adu07g02013 PK_Tyr_Ser-Thr 1.2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02013 - - adu:107459368 194.897