Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02005 ATGGATTCTCTTCTCTCACTCCAAACCCCAAGCAACAACCCACACCCTCATTCACCGCCAGGCCTCACCCCAACGCCGTTACGGTTACAACCAACACAAATGCCGTTACTAGTTCCAAAACCAGAGCCTCTCGACGATTTCTTCTTTTCTAATAATTCCCAACAACGCCCTCACTGGTTCCCTCACCAACAACAACTACAACCACCCCAACCTAACAACAACGAGTTTGAGTTACACGCGCCACCGTTCGCGTCTTCTTCTCCAGAAGAACAAGAAGACTCCGAACTCTACAACCACTTCTTCCGAGTCTCTCAGCTCTTCCGTACAGCTTTCTCTGATACTCTCTTCCAAAAGGACGCCGTTCCGGAACCCGTGACGCCACAATTACAGTCACAGTCGCACTCGAATTTTCAAGATTCTCTTTCCTATGCTTCTAGTTCCCAACCTGAACCTGAGGCTGAGGTTGAGGCAACGCCCGAAGCGGATTCACGCGCCTTGGTTCCCGTTCCGCCATCTTCGTCGTTGGTCGTCGCGGCTCCTTCGAAGCGCGTGAGCAAGAAGAAGTTGCTGGTGAGGGTCTCCAAACTCCGCCTTCACGAGCAGCTTCATTTCCGTGAGGTCGTGAGGCGAACGAGAATGATCTACGACTCGATCCGCGTTCTCTGCACCATCGAGGAAGAGAAGCGCGTCCAGGAGGAGAAAAGAGCTGCCGAGGAGAAGAGAGCTGCCGCCGTCGCTGACGTTGTTACTATTGCCGCTGATGAACCGTTCGCTGCATCTGAATCCACCATTGAATGTTCTTCCTCAGCTGAAACCACCGTCTCTGTTGCCGTGCCAGCTCCTGAATCCGCCGGGGAACAACAATCGGCGACCGACAATGGCGCCGGCAATAAACAGCCGAAAACAGTCAACAGGGGCGAAGCTGATGCCAAGATGGCGCGGCGGATGCGGCAAAGAGGGGATATTCGTGCGGCGAAGATGATGAGGTTGAAGCATCTTTGGCTGAACTGCGATAAGCGAATCGTCGGAGCGATTCCCGGTGTGTATGTTGGCGACGTGTTCCTCTTTCGGATGGAATTGTGTGTCCTTGGATTGCACGGTCAGATCCAGGCTGGCATTGATTACCTGGCAGCTTCCATGAGCCCCAACAATGAACCAATTGCAACGAGTGTCATTGTCTCCGGTGGCTACGAGGATGATATGGACGAAGGAGATGTTATAATCTACACTGGACAAGGCGGGCAGGCCACGAATTCCGTGAGGCAAGCCACACACCAGAAGTTGGAGAGTGGGAACCTGGCATTGGAGAGGAGTATGTATCATAATATTGAGGTTAGAGTGATTAGAGGGATGAAGTATGAGGGAGCCGCTGCAAAATCCGGTAAGATTTATGTCTATGATGGTTTATATAGGATTTCTGAGTGCTGGTTTGATGTTGGAAAGTCCGGTTTTGGTGTTTATAAGTATAAGCTTGTTAGGATTGAATGGCAGCCTAAGATGGGTAGTGCTATTCTTAAGGAAGCTAGGAGCATTAGGAAAAGTGGAGTGGATTTTCAACCAATGTATTGTCTTTCTGTTGATATTTCGAATAAGAAGGAGAAGGTTGCGGTTCGGCTCTTTAATGATATTGATGATAGTAAGGAGCCGCTTTGTTTTGATTATCTTCTGACAACTATTTTCCCTCCATTTGTGTTTCATCAGAGCGGGACAGCTACTGGCTGTGATTGTATTGGCGGTTGTATGGATGGATGCTTTTGCAGTATGAAGAATGGAGGCGAGTTTCCTTATAATCAGCAGGCGATCCTTGTGAGGGGGAAGCCTTTGATTTTTGAGTGTGGCCCTTTTTGCAGTTGTCCACCTCAATGTAGGAACCGTGTGTCGCAGAATGGGGTGAAGAACAAGTTGGAAGTTTTTAGGTCGAAGCAGACAGGTTGGGGAGTAAGGTCCTTGGACCTTATTCATGCTGGTGCTTTTATCTGTGAGTATTCAGGTGTTGTTTTGACTAGGGAGCAAGCACAGCTTTTGACGATGAATGGTGACTCGTTGATATATCCTAATCGGTTTTCTGAAAGGTGGGCAGAATGGGGTGATTTGTCTCAGGTAAACTTGGACTATGTGCGTCCATCTTATCCGTCAATTCCTCCTCTGGATTTTTCTCTGGATGTGTCAACAGTCCGAAACGTTGCTTGCTATATGAGCCATAGTTCAAGTCCAAATGTTATGGTTCAATTTGTTCTGTATGATCACAACAATTTGATGTTCCCTCACATTATGCTGTTTGCAATGGAGAATATCCCTCCACTGAGAGAGCTCAGCCTTGATTATGGGGTGGCTAATGAGTGGACAGGCAAGCTCTCTATATGCATTGTTTCACTGAGACTTAGCTTGATTTTCAGAAGGGTTCAACGTACTCAGATTTTGTGGAACCATTGGAGTGCCTGCTTATGA 2448 0.4824 MDSLLSLQTPSNNPHPHSPPGLTPTPLRLQPTQMPLLVPKPEPLDDFFFSNNSQQRPHWFPHQQQLQPPQPNNNEFELHAPPFASSSPEEQEDSELYNHFFRVSQLFRTAFSDTLFQKDAVPEPVTPQLQSQSHSNFQDSLSYASSSQPEPEAEVEATPEADSRALVPVPPSSSLVVAAPSKRVSKKKLLVRVSKLRLHEQLHFREVVRRTRMIYDSIRVLCTIEEEKRVQEEKRAAEEKRAAAVADVVTIAADEPFAASESTIECSSSAETTVSVAVPAPESAGEQQSATDNGAGNKQPKTVNRGEADAKMARRMRQRGDIRAAKMMRLKHLWLNCDKRIVGAIPGVYVGDVFLFRMELCVLGLHGQIQAGIDYLAASMSPNNEPIATSVIVSGGYEDDMDEGDVIIYTGQGGQATNSVRQATHQKLESGNLALERSMYHNIEVRVIRGMKYEGAAAKSGKIYVYDGLYRISECWFDVGKSGFGVYKYKLVRIEWQPKMGSAILKEARSIRKSGVDFQPMYCLSVDISNKKEKVAVRLFNDIDDSKEPLCFDYLLTTIFPPFVFHQSGTATGCDCIGGCMDGCFCSMKNGGEFPYNQQAILVRGKPLIFECGPFCSCPPQCRNRVSQNGVKNKLEVFRSKQTGWGVRSLDLIHAGAFICEYSGVVLTREQAQLLTMNGDSLIYPNRFSERWAEWGDLSQVNLDYVRPSYPSIPPLDFSLDVSTVRNVACYMSHSSSPNVMVQFVLYDHNNLMFPHIMLFAMENIPPLRELSLDYGVANEWTGKLSICIVSLRLSLIFRRVQRTQILWNHWSACL 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02005 815 SMART G9a_1 338 497 IPR003105 -
Adu07g02005 815 Pfam SET domain 644 776 IPR001214 GO:0005515
Adu07g02005 815 SUPERFAMILY PUA domain-like 325 507 IPR015947 -
Adu07g02005 815 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE FAMILY MEMBER SUVH2-RELATED 310 786 - -
Adu07g02005 815 Gene3D SET domain 502 789 IPR046341 -
Adu07g02005 815 MobiDBLite consensus disorder prediction 1 92 - -
Adu07g02005 815 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE FAMILY MEMBER SUVH2-RELATED 47 245 - -
Adu07g02005 815 MobiDBLite consensus disorder prediction 124 168 - -
Adu07g02005 815 MobiDBLite consensus disorder prediction 281 313 - -
Adu07g02005 815 Pfam SAD/SRA domain 342 495 IPR003105 -
Adu07g02005 815 ProSiteProfiles SET domain profile. 633 776 IPR001214 GO:0005515
Adu07g02005 815 Pfam Pre-SET motif 528 625 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Adu07g02005 815 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 310 786 - -
Adu07g02005 815 MobiDBLite consensus disorder prediction 124 152 - -
Adu07g02005 815 ProSiteProfiles YDG domain profile. 343 493 IPR003105 -
Adu07g02005 815 ProSiteProfiles Pre-SET domain profile. 572 630 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Adu07g02005 815 Coils Coil 227 247 - -
Adu07g02005 815 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 121 809 IPR025794 GO:0016571
Adu07g02005 815 SUPERFAMILY SET domain 518 788 IPR046341 -
Adu07g02005 815 SMART preset_2 525 617 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Adu07g02005 815 Gene3D - 340 501 IPR036987 -
Adu07g02005 815 MobiDBLite consensus disorder prediction 281 300 - -
Adu07g02005 815 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 47 245 - -
Adu07g02005 815 SMART set_7 633 782 IPR001214 GO:0005515
Adu07g02005 815 MobiDBLite consensus disorder prediction 47 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02005 Adu-Chr7 65024935 65029563 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02005 309 778 Su(var)3-9 homologs AT5G04940 41.597 1.58e-103 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Adu07g02005 SAD_SRA 1.7e-47 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02005 K11420 - aip:107626851 1350.11