Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01959 ATGATGTGGGAATGGGAAGAGTTAGACGACGCCGTTCCGCAAAACGACCAGCCTGATACCGATTTCTACCTCAACTTCGATCTCTTCTCTGCTCTCTCTAAGCCCAAGGATTATTATAAGATATTGGAAGTGGATTATGATGCTACGGATGATGCTATTCGTTCTAATTACATTCGTCTAGCTCTGAAATGGCACCCAGACAAGCAGAAAGACCAAGGTGCTGCCACCACGCGGTTCCAAGAGATAAACGAGGCTTATCAGGTTTTGAGTGATCCTGTAAAGAGGAGAGAATATGACAGGAACGGGATGCTTTACGCTTACGATTATGATATCATTGATTATCTTAACCGCTACAAGGGCCTTATATTGACTTGCAACGGCCTTGGAATGAAGCATTCTATATGTGAGCAACAATACTTTTGGAAACTGAAGATGGCCTCCGCTGTCTCTGGCTCTGCCGACTCCTCCAACTGCCTTACCTGGAAGGGGCTCGTCTGCGATGAAGTCTCAGGAGACATCGTCCTTGACTGCCTGTCTGCCTCTCCCTCGGCAGCAAGCTCAATTTCACATTCTTACCGACCTCAAAATGCTCCCTCCCTCTTCCCCGGTCAGCGCATCAGCTCACTCCACCACTTCGACCTCTCCCTTAACCGCTTCAAGGGTGGTTTTCAGCAACTCAGGGTCCTCCATTTACACTCCATTGAGCTCTGGGCTGACGTAGTTGATGTCCACGTTGCCCTTCACAGCGTACAACACGTTGATTTGAGTGCAAACCTGCTCTACGACGACCTCTCTCTTTCTGCCGAAAATGTCTCCTCTATTGCCTACACCTTGCATTTCTTGAACATCAACctcgccgCGGCTATTGCATCACTGTCATCGTGCGCCGCCGTCAAGCTTGTCGCTGCTGCCATCACAAGAAGCAAAGAGAGTAAGAGACGCAATGGAGGTGAGAGGGAGGAGTTGTTGTCACTGCTGACCCACCGTGGAGCTCCATCGCTGTCAGATTCATCTCTGCTTCTGCTGTCATGgccactgcccttcgaggtgctaccgtggtggtcgccaggaagcgctgtcgaggttagccattggagctgcgatctattcttggtttctttcttggtaaaaggctttgctgctgtgagggtggtcagtattgatgccgctgctggggataagtgtagaaatgtagtttgtcgcataattaagttgcgaacaagagatcgagatgatttgaattgggccggaggccgagatgatttgatttgggccggagaccgagttgatttgatttga 1299 0.3888 MMWEWEELDDAVPQNDQPDTDFYLNFDLFSALSKPKDYYKILEVDYDATDDAIRSNYIRLALKWHPDKQKDQGAATTRFQEINEAYQVLSDPVKRREYDRNGMLYAYDYDIIDYLNRYKGLILTCNGLGMKHSICEQQYFWKLKMASAVSGSADSSNCLTWKGLVCDEVSGDIVLDCLSASPSAASSISHSYRPQNAPSLFPGQRISSLHHFDLSLNRFKGGFQQLRVLHLHSIELWADVVDVHVALHSVQHVDLSANLLYDDLSLSAENVSSIAYTLHFLNINLAAAIASLSSCAAVKLVAAAITRSKESKRRNGGEREELLSLLTHRGAPSLSDSSLLLLSWPLPFEVLPWWSPGSAVEVSHWSCDLFLVSFLVKGFAAVRVVSIDAAAGDKCRNVVCRIIKLRTRDRDDLNWAGGRDDLIWAGDRVDLI 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01959 432 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 134 - -
Adu07g01959 432 Gene3D DnaJ domain 29 110 IPR036869 -
Adu07g01959 432 ProSitePatterns Nt-dnaJ domain signature. 79 98 IPR018253 -
Adu07g01959 432 Gene3D Ribonuclease Inhibitor 130 301 IPR032675 -
Adu07g01959 432 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 134 - -
Adu07g01959 432 SUPERFAMILY RNI-like 204 283 - -
Adu07g01959 432 ProSiteProfiles dnaJ domain profile. 37 102 IPR001623 -
Adu07g01959 432 SUPERFAMILY Chaperone J-domain 33 122 IPR036869 -
Adu07g01959 432 SMART dnaj_3 36 94 IPR001623 -
Adu07g01959 432 CDD DnaJ 37 91 IPR001623 -
Adu07g01959 432 Pfam DnaJ domain 37 99 IPR001623 -
Adu07g01959 432 PRINTS DnaJ domain signature 39 57 IPR001623 -
Adu07g01959 432 PRINTS DnaJ domain signature 74 94 IPR001623 -
Adu07g01959 432 PRINTS DnaJ domain signature 57 72 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01959 Adu-Chr7 62834728 62847784 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01959 30 106 C2H2 Transcription Factor Family AT1G74250 44.048 1.43e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01959 - - var:108338470 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g01959 07 62834728 62847784 Adu07g01959 07 62834728 62847784 ECH