Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01953 ATGGAATTTGACGAGCAAGAAGAGCAAGAGGAGGAACTGGGAATACCAGAGGCACCGCAGTCGCAAGCCACGCAAGCGAGTTACGACTCACTCGGAAACTCAGCGAAACTCACCGGGGATGGAACCGCCGCGTCAGGCTTTGGACGAAAAGGAGCAGCAGCGTCGTCGGTGAGGTACCGTGAATGTCAGAAGAACCACGCCGTCAGCTTCGGCGGCCACGCCGTAGACGGTTGCTGCGAGTTCATGGCCGCCGGAGAGGACGGCTCGCTGGAGGCCGTCATCTGCGCTGCCTGTAACTGCCACCGCAACTTTCACCGCAAAGAGATCGACGGCGACATAAGAGGTGGAAGCGGCGCCGGGACCTTGCACCACCACCGTCCTCAACCTCCGCCGCATCTCCACCAATTCTCCCCTTACTACCACCACCGCGGTCCGCCGTACCCGGCAGGGTACCTTCACCACCTTGCGACACCTCCGATGGCTCAGCACCGTCCTCTAGCACTTCCTGCAGCGGTTTCCGGCGGTGGACTAAGCAGAGATGAGGAGGACATGTCGAACCCTAGCAGCAGCGGTGGCGGCGGCGGCGGCGGTGGCTGTGGCGGAAGCGGTTCTTCAAAGAAAAGGTTCAGGACGAAGTTCACGCAGGAACAGAAGGATAAGATGCTTGCTTTCGCTGAACAAGTTGGATGGCGGATCCAGAAGCAAGATGAAGTCATGGTTGAACAGTTCTGTGCCGAAGCTTGCGTTAAGAGGAGCGTTCTCAAGGTTTGGATGCACAATAACAAGAACACTCTTGTGACTGGTGAGAGTGGTGGTGTGGAAAGCGAGAAAGCAAATGGAAGAACAAATTAA 852 0.5739 MEFDEQEEQEEELGIPEAPQSQATQASYDSLGNSAKLTGDGTAASGFGRKGAAASSVRYRECQKNHAVSFGGHAVDGCCEFMAAGEDGSLEAVICAACNCHRNFHRKEIDGDIRGGSGAGTLHHHRPQPPPHLHQFSPYYHHRGPPYPAGYLHHLATPPMAQHRPLALPAAVSGGGLSRDEEDMSNPSSSGGGGGGGGCGGSGSSKKRFRTKFTQEQKDKMLAFAEQVGWRIQKQDEVMVEQFCAEACVKRSVLKVWMHNNKNTLVTGESGGVESEKANGRTN 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01953 283 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 58 109 IPR006456 -
Adu07g01953 283 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 206 263 IPR006455 -
Adu07g01953 283 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 50 266 - -
Adu07g01953 283 MobiDBLite consensus disorder prediction 170 208 - -
Adu07g01953 283 SUPERFAMILY Homeodomain-like 193 264 IPR009057 -
Adu07g01953 283 MobiDBLite consensus disorder prediction 18 40 - -
Adu07g01953 283 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 50 266 - -
Adu07g01953 283 MobiDBLite consensus disorder prediction 1 48 - -
Adu07g01953 283 Pfam ZF-HD protein dimerisation region 57 109 IPR006456 -
Adu07g01953 283 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 59 108 IPR006456 -
Adu07g01953 283 Gene3D - 194 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01953 Adu-Chr7 62417421 62419557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01953 1 265 ZF-HD Transcription Factor Family AT4G24660 48.679 7.29e-68 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Adu07g01953 ZF-HD_dimer 8.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01953 - - ahf:112703242 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g01953 07 62417421 62419557 Adu07g01953 07 62417421 62419557 ECH
Adu07g01953 07 62417421 62419557 Adu08g00761 08 13696158 13697757 PCT