Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01934 ATGGATCATGGAGAACTCTCAAACGGTTTCCCTCATAATCAGAATCAGAATCCAACTACTACTCCTCCTCCTTCATCTAATAATAACCTTCCTTCTTTGAAGAGGAAGAGAAACCTCCCAGGAAACCCAGATCCGGAAGCGGAAGTAATAGCCTTATCCCCAAAGACTCTAATGGCTACAAACAGGTTCTTGTGTGAAACCTGTGGGAAGGGTTTCCAAAGGGATCAAAACCTTCAACTCCATAGAAGAGGACACAACCTTCCATGGAAGCTAAAACAAAGAACAAATAAAGAACCAAAGAAGCGTGTATACGTGTGTCCGGAGAAAACATGTGTCCACAACCACCCTTCAAGGGCTTTGGGAGACTTGACCGGAATTAAGAAGCACTTTTGCAGGAAGCACGGCGAGAAGAAGTGGAAGTGCGACAAATGCTCGAAGCGTTACGCGGTTCAGTCTGATTGGAAAGCCCACTCCAAAATCTGTGGTACAAGAGAATACAAGTGTGATTGTGGAACCATCTTTTCACGGAGGGATAGCTTCATAACTCACAGGGCATTTTGTGATGCATTGGCAGAAGAAACAGCTAGGGTAAATGCAGCATCAAGCATAAACAATTCAACATTAGGGGCTAATAATAGTAACAATAACATTATTGGTTACAATAACATGATGATAGGAACCTCCATGGCCCCTCATCATAATAATAATAATAACATGGCAACCCAATTTGCTTCAATTTGCAATAAGCCAATTCCATTCCCTGAAGAAGCCAGAAATAACCAAACAACAACAAGAGGATTATCCCTTTGGATGGACCATCATCATCATCATCGTCAAGAAGCAACGATGGCCACTAATAACAATAATTACCATCTGAACTGGGTATTCGGATCGAAAATTTCGACCAATCCAAGCCAAGATCTAAGTAGCAATACTACTATTACTAGTACTACTACTACATCGCTTAGTGTTCCTTCATTGTATAGCTCACAACATCAACCCCATCAAACATGTGCTTCTTCGTCGTCGGCGAACATGTCGGCGACGGCATTGTTGCAGAAAGCCGCTCAAGTTGGTGCAACCTCATGTGGTCCATCATCATTCTTGGGGGCATTAGGGTTGAAATGCAGCAATGGTAGTGGTCAAGGGCAAGATGGGAATAACAATAAGTTTTGTGGGGTGTATGGTTCAAGTTTGGTGCTAACAAGTAGTAGTAATAATATTAATACAGAGCCAGAGAACAATGAATTGTCACAAATGCTCCCTTCAAAGAGGAGACATGTAATGCCGAATGAGGAGAGTGGAGGAGGGCAAACTAGGGACTTCCTTGGTGTTGGGGGTGCAAACCACCATTTGCCACCCTTCATCAACCAAAGCTTGGATTTGATTTGA 1392 0.4282 MDHGELSNGFPHNQNQNPTTTPPPSSNNNLPSLKRKRNLPGNPDPEAEVIALSPKTLMATNRFLCETCGKGFQRDQNLQLHRRGHNLPWKLKQRTNKEPKKRVYVCPEKTCVHNHPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKICGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVNAASSINNSTLGANNSNNNIIGYNNMMIGTSMAPHHNNNNNMATQFASICNKPIPFPEEARNNQTTTRGLSLWMDHHHHHRQEATMATNNNNYHLNWVFGSKISTNPSQDLSSNTTITSTTTTSLSVPSLYSSQHQPHQTCASSSSANMSATALLQKAAQVGATSCGPSSFLGALGLKCSNGSGQGQDGNNNKFCGVYGSSLVLTSSSNNINTEPENNELSQMLPSKRRHVMPNEESGGGQTRDFLGVGGANHHLPPFINQSLDLI 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01934 463 Gene3D Classic Zinc Finger 117 197 - -
Adu07g01934 463 MobiDBLite consensus disorder prediction 1 46 - -
Adu07g01934 463 MobiDBLite consensus disorder prediction 8 35 - -
Adu07g01934 463 PANTHER F-BOX ASSOCIATED PROTEIN 27 462 - -
Adu07g01934 463 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 27 462 - -
Adu07g01934 463 SUPERFAMILY beta-beta-alpha zinc fingers 62 159 IPR036236 -
Adu07g01934 463 ProSitePatterns Zinc finger C2H2 type domain signature. 65 85 IPR013087 -
Adu07g01934 463 ProSiteProfiles Zinc finger C2H2 type domain profile. 63 85 IPR013087 -
Adu07g01934 463 Gene3D Classic Zinc Finger 42 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01934 Adu-Chr7 61489502 61492463 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01934 29 446 IDZ Gene Family AT1G03840 52.790 8.20e-137 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu07g01934 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01934 K25870 - ahf:112767274 752.281