Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01933 ATGACCGACCTGATCGAGTGTCATCCACCTTCAAGATGCCATCAAACTATCCACCACCGCGTCCTCTGTCTTCTTCTATCTAAACTATCACTACATGTCATCGTAACTAATAATCTGTTTGTTCAAGATGGTGGATCCTATCCACCTCATTTTCTTTTTCTTTTTCTCCTTATCTTTCACACTCCGCTTGCAACGGCACAGCAGCAGGAGTACCCATTGCCTAAGGTAAGAGGTGACAAGACCATGGTCATTGTCCTCCTCGTCCTCGTGGCCGTCTTCTTCGCCCTAGGCCTCCTCTCCATCTACATTCGCCAATGCTCCGAACGTCGGCACCGTGACCAGCTCCACCCTGCTATCCTCTCTGCCACCTACGGTGGAGGCAACAGCGGGGGGCAGCATCATGGCCTTGGCATTGCGGTGGTGGACTCATTTCCATCCTTCATCTACTCCAACGTGAAGAGTCACAAGATCGGGCAGGGGGCGCTAGAATGCGCCGTGTGCCTATGCGAGTTTCAAGATGAAGAAACGCTGCGTTTGATCCCACAATGCTGCCACGTGTTCCACTCCGACTGCATCGATGTCTGGTTCTCCTCCCACTCAACATGTCCAGTCTGCCGTGCAAACCTCACGCCAAAACCACCTGACACGTCATCACCACAATCCCTCGTTGTAAACATTTCGGATCAACCTGATACGAATCCAGTTAACAGTGAGCCAAATATCATTTCCCTGATCAATGATGGCGACCAGAACAATGCAATAATAACAGAGCCGAAGTCTCATCAGGAGATGAGAACTATTTTTAATTTTGATGAAGAGAATGGTTCGGTTCGGTCATTTTATCGTTTTAACTCGGCCGGTCATTTTACGGTTCGACCGGTAGGAACGGTTAGTTGGAGGGTAACATTTCAAACGGAGAGAAGCCAGAAGGAGGGTTATAGGACAAGGAGTGCAGGAAGCACAGAGCCACCATTTATTGGCATGACCAGATTTGAAAGGTTAGAGAAGGGTGAGAGCATTAAAGGAAATGAGGTTGAAGTAGATGGGGGAGAACGGTCTTTTGATCTTCTATTTCCCAAGGGCTCGAGGGATGAGAATTAG 1101 0.4877 MTDLIECHPPSRCHQTIHHRVLCLLLSKLSLHVIVTNNLFVQDGGSYPPHFLFLFLLIFHTPLATAQQQEYPLPKVRGDKTMVIVLLVLVAVFFALGLLSIYIRQCSERRHRDQLHPAILSATYGGGNSGGQHHGLGIAVVDSFPSFIYSNVKSHKIGQGALECAVCLCEFQDEETLRLIPQCCHVFHSDCIDVWFSSHSTCPVCRANLTPKPPDTSSPQSLVVNISDQPDTNPVNSEPNIISLINDGDQNNAIITEPKSHQEMRTIFNFDEENGSVRSFYRFNSAGHFTVRPVGTVSWRVTFQTERSQKEGYRTRSAGSTEPPFIGMTRFERLEKGESIKGNEVEVDGGERSFDLLFPKGSRDEN 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01933 366 SUPERFAMILY RING/U-box 157 216 - -
Adu07g01933 366 PANTHER RING-H2 FINGER PROTEIN ATL11 52 294 - -
Adu07g01933 366 PANTHER RING FINGER DOMAIN-CONTAINING 52 294 - -
Adu07g01933 366 ProSiteProfiles Zinc finger RING-type profile. 164 206 IPR001841 -
Adu07g01933 366 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 129 212 IPR013083 -
Adu07g01933 366 CDD RING-H2_PA-TM-RING 163 206 - -
Adu07g01933 366 Pfam Ring finger domain 163 206 IPR001841 -
Adu07g01933 366 SMART ring_2 164 205 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01933 Adu-Chr7 61416219 61417319 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01933 53 210 Rapid Response to Elicitors AT3G05200 43.713 2.07e-40 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01933 K10664 - gmx:100815982 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g01933 07 61416219 61417319 Adu07g01933 07 61416219 61417319 ECH
Adu07g01933 07 61416219 61417319 Adu08g00741 08 13427585 13429780 PCT