Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01932 ATGACCCAAAACGGCAGTCTTGTCGAACACTACTACATGATCAGTTTCCTCCTCTTTGCCCTTCTCATGCAGAAGCCGCCAGAAGCAACATCTCAGCTGATAACTGCCGCAAAAACCCCAACATATTTGTCTCAAACATCCCCAATAGGACCACCCAACAAAAATTCCATGGTGGCCATCATGATCATCATCGTCTTTATGTTCCTCCTCTCAGCCTTCATCTCGCTCTACTCGCGCCACTGCACCCGTCGCCCAGCCCGCGTACAGTCTCGCAGGCTGAATATCGCCATGGTAGCGGACGAACTTAACGATCGCCGATCCCACAGTGAGTGTGTTGGCCTCAGCCAAGAGACAATCGAAACATTCCCTACTTGTCTCTACTCCTCCGTGAAGGGCCACAAGATCGGCACGTGCGCATTGGCATGCGCGGTGTGCATAAGCGAGTTCGAGGACCAAGAGACCCTTCGCTTGATCCCCAAATGCAGCCACGTGTTTCACCCAACCTGCATCGACGCCTGGCTGGCATCTCACTCCACGTGTCCCGTTTGCCGCGCCGACCTCGATCCAACGCAAAACGACGTCCATTCATCTTCCATATTCTCAATTCACATTCCTGATGATGACGTCATCACCGAAATGGAGGAGCAGGGCCAAAGCAACGAACAAGAGGACGCTGCTGCTGATGTTAGGGGCAGGGATCAAAACGACGTCGTCGAACCGTTTTCATCGAAAGGTGATTTGCTACGTAGAAGCCGTACGGTGAACGATGTTATGACAGGCCAAACCCTGCGTTCTTTATTGTTTCCGCGGTCTAACTCGGCCGGAACATCCTTAACCAGGGTTCAGACCGGTGATAAGGATTTTGAAAGGTTTACTCTGAGGTTACCGAGTGGGGTTCGAAGCGAGGTTTTCATGAACTCGAGATTGAAGCGTGCAAAGACTTGTGTGGGATTAGTGAGAATGAGTAGTGGGACAAAGGGGTATAGGACAGGAAGCGTTGGCAACTGCCGCGGCGATTACGAGCGGTGGCGGTTTACTTTGACGCCGCCGTTTTTGACCAAGAATTGGAGTCGGTTAGGGAGAAGATCTGCATCCGCTCAGTGTTTAGGGGTGGAGGTGGATAATAATAATGTTGGTGAGCGACCTTCTGATCTCTTGTTCCCTCCATCGACAGCTTAA 1179 0.5165 MTQNGSLVEHYYMISFLLFALLMQKPPEATSQLITAAKTPTYLSQTSPIGPPNKNSMVAIMIIIVFMFLLSAFISLYSRHCTRRPARVQSRRLNIAMVADELNDRRSHSECVGLSQETIETFPTCLYSSVKGHKIGTCALACAVCISEFEDQETLRLIPKCSHVFHPTCIDAWLASHSTCPVCRADLDPTQNDVHSSSIFSIHIPDDDVITEMEEQGQSNEQEDAAADVRGRDQNDVVEPFSSKGDLLRRSRTVNDVMTGQTLRSLLFPRSNSAGTSLTRVQTGDKDFERFTLRLPSGVRSEVFMNSRLKRAKTCVGLVRMSSGTKGYRTGSVGNCRGDYERWRFTLTPPFLTKNWSRLGRRSASAQCLGVEVDNNNVGERPSDLLFPPSTA 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01932 392 ProSiteProfiles Zinc finger RING-type profile. 142 184 IPR001841 -
Adu07g01932 392 PANTHER RING-H2 FINGER PROTEIN ATL11 12 323 - -
Adu07g01932 392 CDD RING-H2_PA-TM-RING 142 184 - -
Adu07g01932 392 SMART ring_2 142 183 IPR001841 -
Adu07g01932 392 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 99 190 IPR013083 -
Adu07g01932 392 Pfam Ring finger domain 141 184 IPR001841 -
Adu07g01932 392 PANTHER RING FINGER DOMAIN-CONTAINING 12 323 - -
Adu07g01932 392 SUPERFAMILY RING/U-box 136 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01932 Adu-Chr7 61371132 61372758 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01932 44 355 Rapid Response to Elicitors AT3G05200 33.436 2.98e-45 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01932 K10664 - gmx:100814384 268.47