Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01882 ATGGGAAGGTCCCCATGCTGCGATGAAAACGGCCTAAAGAAAGGACCATGGACTCCTGAAGAAGATCAAAAGCTAGTCGATCATATTCAGAAACATGGCCATGGAAGTTGGAGAGCTCTTCCTAAGTTAGCAGGGCTTAATAGATGTGGAAAAAGCTGTAGACTAAGGTGGACTAACTATTTGAAGCCTGACATTAAGAGGGGGAAATTCTCCCAAGAAGAGGAGCAAACTATTCTGCATCTGCATTCCATTCTTGGAAATAAATGGTCAGCAATTGCAACTCATCTTCCAGGAAGGACAGACAATGAGATAAAAAATTTCTGGAACACTCATTTAAAGAAGAGGCTAATTCAGATGGGTTTCGATCCAATGACACATCAGCCAAGAACTGATCTTTTTTCAACATTGCCATATCTACTAGCTTTGGCCAGCATCACCGATTTTATGGATCATCATCAATCGTTTGATGAACATTCTCTAAGGCTCCAATTAGAGGCAGTTCAATTAGCAAAGATTCAACAACTTAATTACTTACTTCAATCCACTACTATTTCTACTACTACTACTACTACTACTACTAATAATAATAATAATAATAATTCCTTATTAAGCAACATTATTAGTAGTAGTATTAATACCAATAATAACTCCTATGACCAAAATAATAATTCCATCACAGACATTGAAGCTTTCAATTTATTAAATTCAATCACGAATAATAATGTCAAAGAAAATAACCCAGTTACCACATTTTCTCATGATGAGATTATTGTTGATTCTTCTTCCCAACCACTCCACCAATCAAGCAACATGCTATTACCTCATTTATTAGACCCACAGCCACAAGTCTCTTTGACAAGTTCCCAATCAAGTTTGAATAGTACTAAGCTGGATCAAGGTATTACTACTACTAATAATAATAATAATGATTTGGAAGTTATGGGTAGTGAAGGCGATTATCACATGATTTCTCCATGGAACATCACAACATCTTTATCATCATCTTCGTCATTGTCGTCATCTCCTGCATCTTCATCTGTTCCACTAAATGCAAGCAGCAGCAATACTTCTAGCTATGGTGGAACCTCCTCTTACTGGCCTGAACTTTTTTATGGGAATCCCATTATGCATGATGAGTTATACTAA 1146 0.3656 MGRSPCCDENGLKKGPWTPEEDQKLVDHIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLKPDIKRGKFSQEEEQTILHLHSILGNKWSAIATHLPGRTDNEIKNFWNTHLKKRLIQMGFDPMTHQPRTDLFSTLPYLLALASITDFMDHHQSFDEHSLRLQLEAVQLAKIQQLNYLLQSTTISTTTTTTTTNNNNNNNSLLSNIISSSINTNNNSYDQNNNSITDIEAFNLLNSITNNNVKENNPVTTFSHDEIIVDSSSQPLHQSSNMLLPHLLDPQPQVSLTSSQSSLNSTKLDQGITTTNNNNNDLEVMGSEGDYHMISPWNITTSLSSSSSLSSSPASSSVPLNASSSNTSSYGGTSSYWPELFYGNPIMHDELY 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01882 381 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Adu07g01882 381 CDD SANT 69 112 IPR001005 -
Adu07g01882 381 CDD SANT 16 61 IPR001005 -
Adu07g01882 381 Gene3D - 11 67 - -
Adu07g01882 381 MobiDBLite consensus disorder prediction 281 316 - -
Adu07g01882 381 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Adu07g01882 381 PANTHER TRANSCRIPTION FACTOR MYB39-LIKE 1 257 - -
Adu07g01882 381 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Adu07g01882 381 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Adu07g01882 381 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Adu07g01882 381 Gene3D - 69 116 - -
Adu07g01882 381 MobiDBLite consensus disorder prediction 281 313 - -
Adu07g01882 381 SMART sant 66 114 IPR001005 -
Adu07g01882 381 SMART sant 13 63 IPR001005 -
Adu07g01882 381 MobiDBLite consensus disorder prediction 335 360 - -
Adu07g01882 381 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Adu07g01882 381 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Adu07g01882 381 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01882 Adu-Chr7 58096408 58098235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01882 1 376 MYB Transcription Factor Family AT1G34670 49.750 6.62e-112 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu07g01882 Myb_DNA-binding 8.7e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01882 K09422 - gmx:100782792 401.749