Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01858 ATGTTTATGTCAGCTACAATGGATCAATACACACAACAGTTTCACTCGGATCCATTTCAAGGGGGTGAGTTAATGGAAGTACTTCAACCTTTTTATAGAAGTCTTTCTACGACAACCACCACCACCACAAGCACAATTACTTCATTACCCTCATCATCTAATTCCCATCTACCTTCAACTTCCACCACCTTGAATTCTTCTTCTTACTACAATCCTTCTATCAACTTCTATTCTTCTTCTCCACAGCCTGATTTCTACACTCAACATGGTTGCCCTTCAATGATGACCCCTTTGTTTCCTTCACGTTTATCAAACAGCCAGAATTTCATTGGGTTTGAGCAACCACCGTTTTCTTCTTCTATTGGGCTCAACTATCAGATCCAGGCCCAATCACAAACTCAACAGAGCAACACCCTAAGCTTCCTTAGCCCAAAGCCAATACCCATGAAACAAGGCCCACTAAAGCCCACAAAACTCTACAGAGGCGTACGGCAAAGGCAATGGGGAAAATGGGTGTCTGAGATCAGACTCCCAAAGAACCGCACTCGGCTTTGGCTTGGAACTTTCGAGACTGCCGAGGAAGCTGCTTTGGCTTATGATAAAGCGGCTTTTAAGCTAAGAGGTGATTTAGCGAAGCTCAACTTCCCTAACCTTAAGCACCACGGTTCTTGCATCGTTGGCGGCGGTTTTGGGGAGTATAGGCCTCTTCATTCCGCTGTTGATGCCAAGTTGGATGCTATCTGTGAAAATCTCTCTCAGATTCGGAAACAAGGGAAGCAGGGAAAGAAGCCTGTGATGAGGTTAAAGTCAAAGTCAAAAGCAACAACAGCGAAGGTAGAAGCAGATGATGATGGTTGTTGCAATGTTGAGAGTGAAGAAGCCTCTGCGGGGTCTTCTCCTTTGTCTGATCTTACGTTTGATGACGTCAGTGAGTCACAGTGGGATGCTCCTTCAGAACATTTTTATCTGCAGAAGTTCCCTTCTTATGAGATCAACTGGGATTCTCTATGA 1011 0.4461 MFMSATMDQYTQQFHSDPFQGGELMEVLQPFYRSLSTTTTTTTSTITSLPSSSNSHLPSTSTTLNSSSYYNPSINFYSSSPQPDFYTQHGCPSMMTPLFPSRLSNSQNFIGFEQPPFSSSIGLNYQIQAQSQTQQSNTLSFLSPKPIPMKQGPLKPTKLYRGVRQRQWGKWVSEIRLPKNRTRLWLGTFETAEEAALAYDKAAFKLRGDLAKLNFPNLKHHGSCIVGGGFGEYRPLHSAVDAKLDAICENLSQIRKQGKQGKKPVMRLKSKSKATTAKVEADDDGCCNVESEEASAGSSPLSDLTFDDVSESQWDAPSEHFYLQKFPSYEINWDSL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01858 336 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 3 335 - -
Adu07g01858 336 Gene3D AP2/ERF domain 159 217 IPR036955 GO:0003700|GO:0006355
Adu07g01858 336 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-4 3 335 - -
Adu07g01858 336 MobiDBLite consensus disorder prediction 42 64 - -
Adu07g01858 336 MobiDBLite consensus disorder prediction 292 310 - -
Adu07g01858 336 Pfam AP2 domain 160 208 IPR001471 GO:0003700|GO:0006355
Adu07g01858 336 SUPERFAMILY DNA-binding domain 159 216 IPR016177 GO:0003677
Adu07g01858 336 MobiDBLite consensus disorder prediction 289 310 - -
Adu07g01858 336 PRINTS Ethylene responsive element binding protein signature 160 171 IPR001471 GO:0003700|GO:0006355
Adu07g01858 336 PRINTS Ethylene responsive element binding protein signature 182 198 IPR001471 GO:0003700|GO:0006355
Adu07g01858 336 SMART rav1_2 159 222 IPR001471 GO:0003700|GO:0006355
Adu07g01858 336 CDD AP2 158 218 IPR001471 GO:0003700|GO:0006355
Adu07g01858 336 ProSiteProfiles AP2/ERF domain profile. 159 216 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01858 Adu-Chr7 56629322 56631236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01858 3 336 AP2-EREBP Transcription Factor Family AT1G78080 45.902 1.30e-77 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu07g01858 AP2 8.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01858 K09286 - gmx:732559 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g01858 07 56629322 56631236 Adu08g00688 08 12492331 12494332 PCT