Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01828 ATGGCTTCCGCAGAAATTGAGTACCGTTGCTTCGTTGGTGGGCTTGCCTGGGCCACCGACAACGAAGCCCTCGAGAAAGCCTTCTCTTCCTTTGGCGAGATCGTCGAATCGAAGGTTATCAATGATCGTGAGACTGGAAGGTCGAGGGGTTTCGGATTTGTAACCTTCGCCACAGAGCAGGCCATGAGGGATGCCATCGAGGGGATGAATGGCCAGAACCTTGATGGCCGTAACATCACTGTCAACGAGGCGCAGTCCCGCGGTCGGGGCGGTGGCGGCGGTGGCGGTTACGGTAGCGGTGGCGGCGGTGGTGGCTATGGAGGAGGTGGTTACGGTGGTGGGCGGGACCGTGGGTACGGAGACGGTGGATCTCGTTACTCAAAGGGGGGTGGTGCTTCTGATGGAAATTGGAGGAATTAG 420 0.5857 MASAEIEYRCFVGGLAWATDNEALEKAFSSFGEIVESKVINDRETGRSRGFGFVTFATEQAMRDAIEGMNGQNLDGRNITVNEAQSRGRGGGGGGGYGSGGGGGGYGGGGYGGGRDRGYGDGGSRYSKGGGASDGNWRN 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01828 139 Gene3D - 2 106 IPR012677 -
Adu07g01828 139 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Adu07g01828 139 PANTHER GEO13361P1-RELATED 1 139 - -
Adu07g01828 139 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 8 1 139 - -
Adu07g01828 139 SMART rrm1_1 9 82 IPR000504 GO:0003723
Adu07g01828 139 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Adu07g01828 139 MobiDBLite consensus disorder prediction 68 139 - -
Adu07g01828 139 SUPERFAMILY RNA-binding domain, RBD 8 117 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01828 Adu-Chr7 55481909 55482795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01828 10 88 Eukaryotic Initiation Factors Gene Family AT2G23350 32.911 2.84e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01828 - K13195 vvi:100853676 167.162