Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01825 ATGGCTGCTTCTTCAAACTCCAGTGGTGGAGGAGAGTCATCATGGACCCCAAAGCAGAACAAGCTGTTCGAGAAGGCGCTTGCCAAGTACGACAAGGATACACCAGATAGGTGGCATAATGTGGCAAGGGAAGTTGGTGGGAATAAAACAGCTGAGGAGGTTAAGAGGCACTATGAGATCCTCTTGGAGGATATCAAACACATTGAGTCTGGCCATGTTCCCACACCCAACTACAAGAACAACTCCACTGCTAAAACTTAA 261 0.4751 MAASSNSSGGGESSWTPKQNKLFEKALAKYDKDTPDRWHNVAREVGGNKTAEEVKRHYEILLEDIKHIESGHVPTPNYKNNSTAKT 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01825 86 PANTHER PROTEIN RADIALIS-LIKE 3 1 81 - -
Adu07g01825 86 CDD SANT 15 62 IPR001005 -
Adu07g01825 86 MobiDBLite consensus disorder prediction 1 20 - -
Adu07g01825 86 ProSiteProfiles SANT domain profile. 10 66 IPR017884 -
Adu07g01825 86 ProSiteProfiles Myb-like domain profile. 12 62 IPR001005 -
Adu07g01825 86 Pfam Myb-like DNA-binding domain 13 58 IPR001005 -
Adu07g01825 86 Gene3D - 6 75 - -
Adu07g01825 86 SUPERFAMILY Homeodomain-like 13 70 IPR009057 -
Adu07g01825 86 SMART sant 11 64 IPR001005 -
Adu07g01825 86 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 81 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01825 Adu-Chr7 55285874 55286353 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu07g01825 Myb_DNA-binding 7.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01825 - - pvy:116137097 126.716