Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01813 ATGCACGGTTTCGCTGTGAGGTTGGATGAAGTCAGACGCAATAGCGATGGTTCCGTAATTATGCGCCAAATTGTTTGCAATCGGGCGGGTTCAAGAAAGGAAGAGGTTGAAAAGGACGAAAGAATCAGGGACCACCGACCCCTAACTCAAGGTTGTTGCCGGGCTAGAATTCGTGCAAGACTAGATACAAAAATTCATAAATGGAAGGTTGTTTCGTTCTACGAAGAGCACTCTCATGAATTAGTTGATCCAATCTACGTTAGCATGATGCCTGAGTATCGCACATtcaAATTTGAGGTCATGTGGAGAGACATGGTGGCGAGGTTTAACTTATCAAGCAACTCTTGGGTCGACCAAACCTATGAGTTGAGAAAATTATGGGCTCTTGCTTATTTGAGGGGCCAATTTTTTGGGCGAATCAGGACAACATCCCAGTGTGAAGGGATTAACTCTCTATTAAAAGCATATGTGAGAAAGAGAGATACCCTTCTTGAATTCATCAACAACATGGAAACCATTGTTAGCCATTACAAAAACAATGAAAGAGTTGCAGAGTTCAATAGTAAATATACCAATCCAGTACTTGTGACTTCTTTGCTGACACTTGAAGATTTTTCTGCAAAGACTTTCACTCGTAACATGTTTCAGGAGGTCAGGAAGGAAATTGAGGGTGCTTGTGCAATGAATACAGAGTTGGTAATTCAGGATGGTGGAAAACTATACTTTAAGTGTAACAGTTTTGGAGTGCCAGATATTGATCATGTGGTTGAGTTTGACAGAGTTAGGGGCATGCTTTGTTGCGAGTGTCTGTGGTTTGAAAATAGAGAGATTCCTTGCATGCACATATTCGCCTGCCTAAAGCACCAACACATTAAAGTTATTCCAGAAAGCTTAGTGTGCAAGCGTTGGACGAAGAATGCCAAGAGTGACTTCATGAAGTCAAACGTCAATGATCCAAGTGATTCTGATAAGGTACTAAAGTGTCGTTTTGGTGTGTTGGGTGCTAAGTGTTCTAGGTTGATGGATTTGGCCTGTAAGAACTCAAGTGATTTTTTCAAAGCAATGAATAGTGTTGTTAACACAATTACAAAATTCCAAAAGCGAGGTGAAAATTCACGCAACACTAACTTAGACGATGACTACGTTGTTGACCCATTGGTGGGGAAGAATATGGGAGCTCACAAGAAAAACTCAAAATTCAAGCAACAAAGAAAATGTTCAAACTGCGGTGTGACAGGGCACTACAACAAAAGTTATTCTAATGCTCCTGGTAGAATCCCAAAGGAGCTATGCAAAAGACATGAAAATGTGAAAAATCAGCAGAAGATGGAAAAAGATAGGAACACTGTTGGTAGAACAGCACCAACCTCAGTAGCTAAGTCGGCTTTTACTGATCAAGTGAAAACATCAAGTCCTGGTCCCAATACCTTGGTTTGTGCATCTACAGGTAACAAAGAGTCCGGGATGGGTTTCAGACTAGCTGAGTCTTCTGTTGTGGCCCCTAAAACTGGAATGGCAGATTGA 1524 0.4127 MHGFAVRLDEVRRNSDGSVIMRQIVCNRAGSRKEEVEKDERIRDHRPLTQGCCRARIRARLDTKIHKWKVVSFYEEHSHELVDPIYVSMMPEYRTFKFEVMWRDMVARFNLSSNSWVDQTYELRKLWALAYLRGQFFGRIRTTSQCEGINSLLKAYVRKRDTLLEFINNMETIVSHYKNNERVAEFNSKYTNPVLVTSLLTLEDFSAKTFTRNMFQEVRKEIEGACAMNTELVIQDGGKLYFKCNSFGVPDIDHVVEFDRVRGMLCCECLWFENREIPCMHIFACLKHQHIKVIPESLVCKRWTKNAKSDFMKSNVNDPSDSDKVLKCRFGVLGAKCSRLMDLACKNSSDFFKAMNSVVNTITKFQKRGENSRNTNLDDDYVVDPLVGKNMGAHKKNSKFKQQRKCSNCGVTGHYNKSYSNAPGRIPKELCKRHENVKNQQKMEKDRNTVGRTAPTSVAKSAFTDQVKTSSPGPNTLVCASTGNKESGMGFRLAESSVVAPKTGMAD 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01813 507 ProSiteProfiles Zinc finger SWIM-type profile. 252 290 IPR007527 GO:0008270
Adu07g01813 507 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 97 343 - -
Adu07g01813 507 Pfam FAR1 DNA-binding domain 2 82 IPR004330 -
Adu07g01813 507 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 97 343 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01813 Adu-Chr7 54880873 54883256 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu07g01813 FAR1 4.1e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01813 - - ahf:112729906 683.715