Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu07g01797 | ATGCCAACGGCAACAAACAGTATTGAAAAAGAAGAAGAAGAAACAGGGATAAAGGGGGATCAAAGTTCAACGAAGTGCCAAGACTGTGGGAACCAAGCGAAGAAGGAGTGTTCATATTGGAGGTGCAGAACATGCTGCAAGAACAAAGGATTCCATTGTCAAACCCATATCAAGAGCACTTGGGTCCCCGTTGACCGAAGGCGCCTCAGGAAAGTAAATAACCACTTTCAGTTGTACCACCCACATATCTCCAAAAAGCACAAGCACTTCTACTCACCATCACCAGAGGACAAGTTAAAGTTGCCATCTGCTACGAATTCCATGGCTATATTTCGGCGCGTTGAGGTTAGGTCAATGGATCATGCGGTTAACGAAATTGGCTATCAAACATGTGTCAACATTGGAGGACATGTATTTAGTGGTCTTCTATATGATCATGGCCCT | 444 | 0.4437 | MPTATNSIEKEEEETGIKGDQSSTKCQDCGNQAKKECSYWRCRTCCKNKGFHCQTHIKSTWVPVDRRRLRKVNNHFQLYHPHISKKHKHFYSPSPEDKLKLPSATNSMAIFRRVEVRSMDHAVNEIGYQTCVNIGGHVFSGLLYDHGP | 148 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu07g01797 | 148 | TIGRFAM | put_zinc_LRP1: putative zinc finger domain, LRP1 type | 25 | 67 | IPR006510 | - | |
Adu07g01797 | 148 | TIGRFAM | LRP1_Cterm: LRP1 C-terminal domain | 101 | 148 | IPR006511 | - | |
Adu07g01797 | 148 | PANTHER | PROTEIN LATERAL ROOT PRIMORDIUM 1 | 19 | 148 | IPR007818 | GO:0003700|GO:0006355 | |
Adu07g01797 | 148 | Pfam | Domain of unknown function (DUF702) | 23 | 148 | - | - | |
Adu07g01797 | 148 | PANTHER | BNAC01G23660D PROTEIN | 19 | 148 | - | - | |
Adu07g01797 | 148 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu07g01797 | Adu-Chr7 | 54014540 | 54015214 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu07g01797 | 25 | 147 | C2H2 Transcription Factor Family | AT2G21400 | 47.328 | 4.32e-36 | 121 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | SRS | Adu07g01797 | DUF702 | 2.8e-40 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu07g01797 | - | - | aip:110269564 | 180.259 |