Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01791 ATGAAGATCCAATGTGATGCGTGTGACAAAGACGAGGCATCTCTATTCTGTCCTGCAGATGAAGCCGCTCTCTGCCATGCCTGTGACCTTACAATCCACCATGCTAACAAGCTCGCAATCAAGCACACGCGCTTCACTCTCCACCAGCCTTCCTCCAAAGACACCCCTCGCTGCGATATCTGCCAAGAAAGGCGTGCATATCTGTTTTGCAAAGAAGACAGAGCAATACTTTGCAGAGAATGCGATGTTCCTATCCACAAAGCCAACGAACACACGCAGAACCATAGCAGGTTCCTTCTCACTGGTGTGAAGCTCTCTGGTTCCTCTCTCGACACGGCTTCATCATCATCAGTCACCAGCTCAACTGAGGCAAGAAGCTCCCGTTCAAGAATGAAGAGACCCACTGCTTTCAATAATGAGCACAATATGTCTGCGGCTACTACTAGTAATAGTGACACCGGTTCGGCTTCCTCAAGCAGCATATCCAAATTCTTGATTGAAACCATTCCCGGTTACTGCTTCGAAGACCTTCTCGATGCTTCCTTTCCACATAATAATGGTTTCTGTAAGAATCAACATTTAATGTCAGTGACAATATGTGGTTATTATTTTCAACTTGGATTGTTTCCCAGATCAGTTCTGTAG 645 0.4605 MKIQCDACDKDEASLFCPADEAALCHACDLTIHHANKLAIKHTRFTLHQPSSKDTPRCDICQERRAYLFCKEDRAILCRECDVPIHKANEHTQNHSRFLLTGVKLSGSSLDTASSSSVTSSTEARSSRSRMKRPTAFNNEHNMSAATTSNSDTGSASSSSISKFLIETIPGYCFEDLLDASFPHNNGFCKNQHLMSVTICGYYFQLGLFPRSVL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01791 214 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Adu07g01791 214 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 194 - -
Adu07g01791 214 PANTHER B-BOX ZINC FINGER PROTEIN 20 1 194 - -
Adu07g01791 214 SMART bboxneu5 4 47 IPR000315 GO:0008270
Adu07g01791 214 SMART bboxneu5 53 100 IPR000315 GO:0008270
Adu07g01791 214 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Adu07g01791 214 MobiDBLite consensus disorder prediction 108 156 - -
Adu07g01791 214 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
Adu07g01791 214 Pfam B-box zinc finger 55 92 IPR000315 GO:0008270
Adu07g01791 214 CDD Bbox1_BBX-like 5 47 - -
Adu07g01791 214 CDD Bbox1_BBX-like 58 100 - -
Adu07g01791 214 Gene3D Classic Zinc Finger 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01791 Adu-Chr7 53820994 53822159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01791 1 190 C2C2-CO-like Transcription Factor Family AT1G75540 47.343 1.66e-56 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Adu07g01791 zf-B_box 5.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01791 - - adu:107458960 390.963