Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01778 GAAAATTTCCTACTGAACCATCAATGCTGGATAAAACTCCTGCTAAGGCTCAATCTGTGATTGATCCACATTACTCATCTTCATACTCTGGCAAGTCTCATTTGGCGGTACAAGCTATGGAAGGTCAAGCTGGAGGAAGACCATCATTTGATCATAATAGTGGATCACATAATCCTCTTGGTTCTCCTGGACAAAATGCTGGAGGAAGTTGGAGATCTAAAGATACCATGAATTCTTTAGCAAGTCGACCTTCATTGGCAGTTGAAGTTCCCAAGAATCTGGCAAATGGTTGGGGTTCTGATGCTGGACTCAGAAATGAAGCAACAAATCTTCCTTCACCTACACCCCAGACTGCTTCAGGTGGGACCAAGATGCAGGCTTTTGAAAATAAATGGTCTCCAACTCCAACCCCTGTCCTATTGGCTGGCTCTCTCTTAGGAAATTCACTCCCCATTGGGCCTGAAAGTCGTTCAAGTTCACAACCTGGAATGATATCAGCTTCTAAATCAGATAATAATCAAGTACATGTTCATGCAGCATTACCTGCGATTGCTTCAGGTGTTGACATTCAGACAGCAGGTGTACACTTGCAAAGTCAGAGTGTCAGTAACCATACCTCCCGTGCCGAAGGCCATCAAGGGTGGGGCTCTGGTACGGCTCCAAAGCCTGAAGTACAGACGTGGGGAGGTGCTCAACCTCAAAGGATAGAACCAAATAATCCAGTTACTATGCCTGCACAGCCAGCTTCCCATGGTCACTGGGTTGATACTACATCCGTCCAGAACTCTGCCTCATATAGCAATGGAAATCCTAATGGGGCCTTCTCTACACCGAGCTTTCCAGGCATGACTACACCTACACCTACACCTACACCTGAACCATGGAGACCGCCAAGTTCAAATAGTCAGTCAAACATAGCAGCAGCAGCACCATCCAATGTACCTTATGCTGGTTGGGGTATGCCAGGAAATCAGAATATTAACTGGAGTGGACCTCTACCTGCAAATGTGAACGTAAACTGGATGCCTGGACAGGGGCCAGGACCCAGTAATGCAACTCCAGTATGGGGTGCTCCTAGCCAGGGACCACCTGCGGCAAATGCTGTTGGCTGGGTTGCACCTGGTCAAGGACGTCCGCATGTAAATGCAAATGCAGGTTGGGTTGCACCTGGTCAAGGGCCAACGGTGGGAAGTACTAATCCTGGTTGGGGTTCTTCATCTGGAAATCCAGGCACGTGGGGTGGCGAGCAAAGTCGCAATGGGGAGAGATTCCACAGCCAGGGCGATCGTGGAACACATGGTGGAGATTCTGGTTATGGAGGTAAATCCTGGAACAGGCAATCATCATTTAATGGCAGCGGAAGAGGAGGTTCTTCCAGGCCTTCTGTTGGGGGACAAAGAGGAGTATGTAAGTTCCACGAGAGTGGACATTGCAAGAAGGGGGCTTCCTGTGATTTTATGCACACTTAA 1469 0.484 KFPTEPSMLDKTPAKAQSVIDPHYSSSYSGKSHLAVQAMEGQAGGRPSFDHNSGSHNPLGSPGQNAGGSWRSKDTMNSLASRPSLAVEVPKNLANGWGSDAGLRNEATNLPSPTPQTASGGTKMQAFENKWSPTPTPVLLAGSLLGNSLPIGPESRSSSQPGMISASKSDNNQVHVHAALPAIASGVDIQTAGVHLQSQSVSNHTSRAEGHQGWGSGTAPKPEVQTWGGAQPQRIEPNNPVTMPAQPASHGHWVDTTSVQNSASYSNGNPNGAFSTPSFPGMTTPTPTPTPEPWRPPSSNSQSNIAAAAPSNVPYAGWGMPGNQNINWSGPLPANVNVNWMPGQGPGPSNATPVWGAPSQGPPAANAVGWVAPGQGRPHVNANAGWVAPGQGPTVGSTNPGWGSSSGNPGTWGGEQSRNGERFHSQGDRGTHGGDSGYGGKSWNRQSSFNGSGRGGSSRPSVGGQRGVCKFHESGHCKKGASCDFMHT 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01778 488 MobiDBLite consensus disorder prediction 282 296 - -
Adu07g01778 488 MobiDBLite consensus disorder prediction 48 81 - -
Adu07g01778 488 MobiDBLite consensus disorder prediction 389 488 - -
Adu07g01778 488 MobiDBLite consensus disorder prediction 471 488 - -
Adu07g01778 488 MobiDBLite consensus disorder prediction 197 212 - -
Adu07g01778 488 ProSiteProfiles Zinc finger C3H1-type profile. 463 488 IPR000571 GO:0046872
Adu07g01778 488 SUPERFAMILY CCCH zinc finger 466 487 IPR036855 GO:0046872
Adu07g01778 488 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19 1 488 - -
Adu07g01778 488 PANTHER UNCHARACTERIZED 1 488 - -
Adu07g01778 488 MobiDBLite consensus disorder prediction 19 33 - -
Adu07g01778 488 MobiDBLite consensus disorder prediction 392 420 - -
Adu07g01778 488 MobiDBLite consensus disorder prediction 197 305 - -
Adu07g01778 488 MobiDBLite consensus disorder prediction 1 81 - -
Adu07g01778 488 MobiDBLite consensus disorder prediction 231 281 - -
Adu07g01778 488 MobiDBLite consensus disorder prediction 440 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01778 Adu-Chr7 53145364 53146832 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Adu07g01778 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01778 - - aip:107608758 931.784