Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01770 ATGATCTCCTCCAGCTCATGCTCCTTCCTGAGCAACTCAGCTGTAGCTGGGTCTCGCAGCTTCTGTGGTGGTGCGAGGAAGGGTCATTCGAGTCCTTTCAGGGTGGTGTGTTTGGCTCCAAGCAATGACAGGAACGGAAGCGTTGTGTTAGATTCTCCCGCGAAGAAAGAGCAGATAAGAAATGAACCAACATCGCCGCCTGCTGAAGAGGAAACAGTCTCTTCCGGTGGCCCTCAGGATGTCTACGGCGAGGATAAGGCCACGGAGGATCAGTTTGTTACCCCCTGGAATGTCTCTGTTGCTAGCGGTTATACATTGTTGCGAGATCCCCACTTCAATAAAGGGTTGGCCTTCACTGAGAAGGAGAGGGATGCTCACTACTTGCGAGGTCTTCTTCCCCCGACAGTTATTCCGCAGGAAACTCAGGTGAAGAAAATGATCCAGCACGTTCGTCAGTATCAAGTTCCATTGCAGAAGTACATGGCAATGATGGATCTTCAGGAGAGGAATGAACGGTTGTTTTATAAGCTTCTTATTGAGCACGTCGAAGAGTTACTCCCAGTTGTCTATACTCCAACTGTTGGTGAAGCTTGCCAGAAATACGGAAGCATCTTTATGCGTCCTCAGGGTCTTTATATCAGCTTGAAAGAGAAGGGGAGGATTCTTGAAGTACTAAGGAATTGGCCTGAGAAGAACATTCAAGTCATTGTTGTAACTGATGGAGAACGGATCTTGGGTCTTGGGGATCTTGGTTGTCAGGGAATGGGAATACCAGTTGGAAAACTTTCTTTATATACAGCACTCGGAGGAGTTCGTCCGTCTGCCTGTTTGCCTATCACCATTGATGTGGGAACAAACAACGAGAACTTGTTGAATGATGAGTTATATATAGGGCTCAAGCAAAGACGGGCGACTGGGCAGGAATATGCTGAACTTATGCATGAATTTATGAGTGCTGTCAAGCAAAATTACGGGGAGAAAGTCCTCATTCAGTTTGAAGACTTTGCGAACCACAACGCATTTGATCTACTTGAAAAATATAGATCAACCCATCTTGTTTTCAATGATGATATTCAAGGTACAGCATCAGTCGTCCTTGCTGGACTAGTTGCAGCTCTGAAATTGGTTGGGGGCAACTTGGCTGACCACAGATTCTTGTTCCTTGGTGCTGGAGAGGCTGGCACTGGAATTGCAGAACTTATTGCACTTGAAACATCAAAACAGACTAATGCCCCACTAGATGAAGTGCGCAAGAACATTTGGTTGGTGGACTCAAAGGGATTGATTGTCAGTTCCCGAAAAGAATCGCTTCAACATTTTAAGAAGCCATGGGCCCATGATCACGAACCCGTTCATCGACTCGTAGATGCTGTTAATAAAATCAAACCAACAGTGTTGATTGGAACCTCTGGACAAGGAAGAACTTTCACTAAAGAAGTTATTGAGGCAATGGCTTCAATCAATGAGAAACCTATCATTCTTTCACTTTCCAACCCAACTTCACAATCAGAATGTACTGCTGAAGAGGCTTACAAGTGGAGCCAGGGCCGCGCCATTTTCGCTAGCGGAAGCCCATTCCCTCCGGTTGAGTATGAAGGAAAAGCTTTTGTGCCTGGCCAGGCCAATAATGCATACATATTCCCCGGATTCGGTCTTGGTTTAATAATGTCCGGTACCATTCGGGTCCACGACGACCTCCTTCTCGCCGCATCGGAGGCTTTGGCTGCACAAGTGAGTGAAGAGAACTTTGAGAAAGGACTGATATACCCTCCATTCACCAACATCAGAAAGATTTCAGCACACATTGCTGCCAGTGTTGCTGCTAAGGCTTATGAGCTTGGGTTGGCCACTCGCCTTCCACAACCCAAGGATTTGGTTAAGTTTGCTGAGAGCTGTATGTACACCCCAGCCTACAGAAGCTACCGGTGA 1929 0.4671 MISSSSCSFLSNSAVAGSRSFCGGARKGHSSPFRVVCLAPSNDRNGSVVLDSPAKKEQIRNEPTSPPAEEETVSSGGPQDVYGEDKATEDQFVTPWNVSVASGYTLLRDPHFNKGLAFTEKERDAHYLRGLLPPTVIPQETQVKKMIQHVRQYQVPLQKYMAMMDLQERNERLFYKLLIEHVEELLPVVYTPTVGEACQKYGSIFMRPQGLYISLKEKGRILEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNENLLNDELYIGLKQRRATGQEYAELMHEFMSAVKQNYGEKVLIQFEDFANHNAFDLLEKYRSTHLVFNDDIQGTASVVLAGLVAALKLVGGNLADHRFLFLGAGEAGTGIAELIALETSKQTNAPLDEVRKNIWLVDSKGLIVSSRKESLQHFKKPWAHDHEPVHRLVDAVNKIKPTVLIGTSGQGRTFTKEVIEAMASINEKPIILSLSNPTSQSECTAEEAYKWSQGRAIFASGSPFPPVEYEGKAFVPGQANNAYIFPGFGLGLIMSGTIRVHDDLLLAASEALAAQVSEENFEKGLIYPPFTNIRKISAHIAASVAAKAYELGLATRLPQPKDLVKFAESCMYTPAYRSYR 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01770 642 MobiDBLite consensus disorder prediction 46 83 - -
Adu07g01770 642 PIRSF ME 65 642 IPR001891 GO:0004470|GO:0004471
Adu07g01770 642 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 83 357 IPR046346 -
Adu07g01770 642 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 358 641 IPR036291 -
Adu07g01770 642 CDD NAD_bind_1_malic_enz 358 636 - -
Adu07g01770 642 ProSitePatterns Malic enzymes signature. 354 370 IPR015884 GO:0004471
Adu07g01770 642 Gene3D - 356 642 - -
Adu07g01770 642 SMART malic_2 167 348 IPR012301 GO:0004471
Adu07g01770 642 PANTHER MALIC ENZYME-RELATED 72 642 - -
Adu07g01770 642 Gene3D - 101 355 IPR037062 GO:0004471
Adu07g01770 642 PANTHER NADP-DEPENDENT MALIC ENZYME 4, CHLOROPLASTIC 72 642 - -
Adu07g01770 642 Pfam Malic enzyme, NAD binding domain 358 610 IPR012302 GO:0051287
Adu07g01770 642 SMART Malic_M_2 358 611 IPR012302 GO:0051287
Adu07g01770 642 PRINTS Malic enzyme signature 173 197 IPR001891 GO:0004470|GO:0004471
Adu07g01770 642 PRINTS Malic enzyme signature 233 262 IPR001891 GO:0004470|GO:0004471
Adu07g01770 642 PRINTS Malic enzyme signature 269 291 IPR001891 GO:0004470|GO:0004471
Adu07g01770 642 PRINTS Malic enzyme signature 329 347 IPR001891 GO:0004470|GO:0004471
Adu07g01770 642 PRINTS Malic enzyme signature 354 370 IPR001891 GO:0004470|GO:0004471
Adu07g01770 642 PRINTS Malic enzyme signature 385 401 IPR001891 GO:0004470|GO:0004471
Adu07g01770 642 PRINTS Malic enzyme signature 488 504 IPR001891 GO:0004470|GO:0004471
Adu07g01770 642 Pfam Malic enzyme, N-terminal domain 167 348 IPR012301 GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01770 Adu-Chr7 52961229 52967193 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01770 K00029 - gmx:100791514 1105.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00311 09 3291242 3298122 Adu07g01770 07 52961229 52967193 ECH
Adu03g01866 03 32690284 32694457 Adu07g01770 07 52961229 52967193 ECH
Adu08g00871 08 16245153 16249381 Adu07g01770 07 52961229 52967193 ECH
Adu07g01770 07 52961229 52967193 Adu07g01770 07 52961229 52967193 ECH
Adu07g01770 07 52961229 52967193 Adu08g00871 08 16245153 16249381 ECH
Adu07g01770 07 52961229 52967193 Adu09g00311 09 3291242 3298122 PCT