Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01769 ATGACTCGGCGGTGCTCACACTGTAGCAACAACGGCCACAATTCCAGGACATGCCCCAACCGCGGCGGCGGCGGAGTGAAGCTGTTCGGTGTGAGGCTGACGGATGGATCAATCATAAAGAAGAGTGCGAGTATGGGGAATCTGATGACGCTTCACCACCATTGTTCGTCTCCTTCTTCCTCGTTTGTGGCCACCGCCGGCGATAACCCAGGCTCGCCTGATCCCGTTGGTTACTTGTCCGACGACCCTGCCCACGCCTCGTCCTTCGCCAACCGCCGTGGCGAAAGAAAGAAAGGTGTTCCATGGACTGAAGAAGAACATCGGATGTTCTTAGTTGGTCTGCAAAAGCTGGGGAAAGGAGATTGGCGTGGAATATCACGTAATTTTGTTGTATCAAGAACCCCTACTCAAGTAGCAAGTCATGCCCAGAAGTATTTTATCCGACAGAGTAATGCTACCCGGAGAAAGAGGCGTTCCAGCCTCTTTGACATGGCTCCAGATATGCCTACGGAACCGCCTTCGGTGCTGGAAAAACAAGTACTGCTTCTGACCTCTGAGAACTCACAATCTCCCAATGTAAAATCACAACCTTCATTAAATCTATCTCTCAAATCTGAAGTTGACCCCATGGAAATTGCTTCTGAGGAAAATGTGAAAGAGAACAATGTAGCTAATGGGTTGAAAACAAAGGCTCCTGAATACTTCCCAACTTATGTACCTGTCCAATTTTCCATATGGCCATCACTGGAAGCTTCCTTTCAAGAAAGTAATGGAGTAGAGACATCTCATCATGAGGTTGTAAAGCCAATTCCAGTCGTTCCCAAGAATCCGGTCAATGTTGATGCACTTGTGGGAATGAATGGCTTCTTACAGGCCTTTTCTTCCTCAATCTTCGTTTCGTCCACCAAGTCAAAGTCAAAACCACCACCACCACCACCACCACCACCACCACCACCACCTCCACCTGCACCTGCACCTTCAATGTACTATCCTCCTAATCAATACTCTCAGTACAATCAGCAGCAGCCACCACTGCCTCCTTCTTCGCCACCGCCCAGTGCATCTATGCCACCACCACCTCCCCCTAGTTCACCACCACCTCCTGCTTCAGCTTCTTTGCAAAGTCAAAGGAACGAGGAAAGGCAATCGCATGATCGCAGTAAAGGGAAGCTGAAGGAGGCTTCAACTTCCGCCAGAGGCATTCCTCATAAACAGCAGAAGCCAATGCCAATGAAGAAATCGAATGGGCCTCCTGGGAGAGCTGAGACGGAGGAGGAAAGGAGGTTGAGAAAAAAGAGAGAATTTGAGAAGCACAGGCAGCAGCTGAAGGATTCACAGAACAGTGTTCTGCCAAAGACTCAGGTATCTGGGAAGGGGCATGGTTCGGTTATAGGGTCACGGATGGGAGAAAAGAGGACTACTCCTTTATTGAGTGGTGAAAGGATTGAAAATAGGTTGAAGAAGCCAACTACATTTCTATGCAAGATGAGGTTCCGAAATGAACTTCCAGATCCAAGTGCACAACCCAAGCTAATGGCATTCAAGAAAGACAAAGATGAATATGCAAAATATACGATCACATCCCTGGAGAAAATGTACAAACCCAAGCTTTTTGTGGAGCCTGATCTTGGGATACCTTTAGACCTGCTTGATCTCAGTGTTTACAATCCTTCCAGTGTTAGACCACCCCTTGAACCAGAAGATGAAGAACTGTTGCGAGACGATGAAGTTGTTACTCCAATGAAAAAAGGTGGCATAAAAAGAAAAGAAAGACCTACTGACAAAGGTGTTGCATGGCTTGTCAAAACACAGTATATATCTCCTCTAAGCATGGAATCGACAAAACAGTCTTTTACTGAAAAGCAAGCAAAGGAACTGAGAGAGATGAAGGGTCGCAATATTTTGGAAAATATTAACAACAGGGAAAGACAAATAAAAGAAATAGAAGCATCATTTGAAGCGGCTAAATCACATCCCGTTCATGCAACTAACAAAGATGTGTATCCTGTTGAGATTCTGCCGTTGCTGCCTGATTTTGATAGGTACGATGATCAGTTTGTTGTTGCGGCATTTGATAATGCTCCTACAGCTGATTCTGAAAGCTACAATAAGTTGGACAAATCTACACGTGACGCCCATGAGTCGCAGGCAATTATGAAAAGCTATGTTGCATCGGGTTTGGATCCTGCAAATCCTGAGAAATTCTTAGCTTATATGGTCCCAGCACCTGGAGAGATGTCAAAGGATATATATGACGAAAACGAAGACGTCTCATATTCTTGGGTCCGCGAATATCACTGGGATGTACGGGGCGATGATGCACATGACCCTACGACGTACTTGGTTTCATTTGACGAGTCAGAGGCACGCTATTTGCCTCTTCCTACAAAGCTTGTTTTAAGAAAAAAGAGAGCCAGAGAGGGAAGATCTGGTGATGAGGTTGAACAATTTCCAATACCTTCAAGAGTGACTGTAAGACGACGGCCGAACGCAGCTGCAATTGAACTGATGGATTCTGAGGCTTATGCAAATACGAAGGGAGGGGACGTAGAAATGGATGATGACGACGACATGGAAGAGCAACATAGGGTTGCTAATGTTATGCAGCAGCAGGATAATTATCAGTCTAGTGGAGCAGAAGATGACATCTATGATTGA 2658 0.4601 MTRRCSHCSNNGHNSRTCPNRGGGGVKLFGVRLTDGSIIKKSASMGNLMTLHHHCSSPSSSFVATAGDNPGSPDPVGYLSDDPAHASSFANRRGERKKGVPWTEEEHRMFLVGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNATRRKRRSSLFDMAPDMPTEPPSVLEKQVLLLTSENSQSPNVKSQPSLNLSLKSEVDPMEIASEENVKENNVANGLKTKAPEYFPTYVPVQFSIWPSLEASFQESNGVETSHHEVVKPIPVVPKNPVNVDALVGMNGFLQAFSSSIFVSSTKSKSKPPPPPPPPPPPPPPPAPAPSMYYPPNQYSQYNQQQPPLPPSSPPPSASMPPPPPPSSPPPPASASLQSQRNEERQSHDRSKGKLKEASTSARGIPHKQQKPMPMKKSNGPPGRAETEEERRLRKKREFEKHRQQLKDSQNSVLPKTQVSGKGHGSVIGSRMGEKRTTPLLSGERIENRLKKPTTFLCKMRFRNELPDPSAQPKLMAFKKDKDEYAKYTITSLEKMYKPKLFVEPDLGIPLDLLDLSVYNPSSVRPPLEPEDEELLRDDEVVTPMKKGGIKRKERPTDKGVAWLVKTQYISPLSMESTKQSFTEKQAKELREMKGRNILENINNRERQIKEIEASFEAAKSHPVHATNKDVYPVEILPLLPDFDRYDDQFVVAAFDNAPTADSESYNKLDKSTRDAHESQAIMKSYVASGLDPANPEKFLAYMVPAPGEMSKDIYDENEDVSYSWVREYHWDVRGDDAHDPTTYLVSFDESEARYLPLPTKLVLRKKRAREGRSGDEVEQFPIPSRVTVRRRPNAAAIELMDSEAYANTKGGDVEMDDDDDMEEQHRVANVMQQQDNYQSSGAEDDIYD 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01769 885 MobiDBLite consensus disorder prediction 300 483 - -
Adu07g01769 885 MobiDBLite consensus disorder prediction 1 18 - -
Adu07g01769 885 Pfam Paf1 492 873 IPR007133 GO:0006368|GO:0016570|GO:0016593
Adu07g01769 885 MobiDBLite consensus disorder prediction 378 393 - -
Adu07g01769 885 SMART sant 98 148 IPR001005 -
Adu07g01769 885 MobiDBLite consensus disorder prediction 343 369 - -
Adu07g01769 885 MobiDBLite consensus disorder prediction 1 21 - -
Adu07g01769 885 PANTHER RNA POLYMERASE II ASSOCIATED FACTOR PAF1-RELATED 468 861 - -
Adu07g01769 885 MobiDBLite consensus disorder prediction 418 443 - -
Adu07g01769 885 Gene3D - 102 151 - -
Adu07g01769 885 SUPERFAMILY beta-sandwich domain of Sec23/24 308 377 - -
Adu07g01769 885 MobiDBLite consensus disorder prediction 59 99 - -
Adu07g01769 885 PANTHER RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG 468 861 IPR007133 GO:0006368|GO:0016570|GO:0016593
Adu07g01769 885 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 94 150 IPR017930 -
Adu07g01769 885 MobiDBLite consensus disorder prediction 864 878 - -
Adu07g01769 885 Pfam Myb-like DNA-binding domain 101 146 IPR001005 -
Adu07g01769 885 ProSiteProfiles Myb-like domain profile. 94 146 IPR001005 -
Adu07g01769 885 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 97 149 IPR006447 GO:0003677
Adu07g01769 885 Coils Coil 421 441 - -
Adu07g01769 885 Coils Coil 638 658 - -
Adu07g01769 885 CDD SANT 101 146 IPR001005 -
Adu07g01769 885 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Adu07g01769 885 MobiDBLite consensus disorder prediction 305 329 - -
Adu07g01769 885 SUPERFAMILY Homeodomain-like 96 151 IPR009057 -
Adu07g01769 885 MobiDBLite consensus disorder prediction 837 885 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01769 Adu-Chr7 52948923 52956565 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu07g01769 Paf1 5.7e-57 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01769 K15174 - gmx:100797526 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g01769 07 52948923 52956565 Adu07g01769 07 52948923 52956565 ECH