Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01754 ATGGATGGTCTGAGTTGGGATCCTTCTTCACAACTTGCTGTTAATAACATACCAATGTTGGAAGGAGAAGAAGACTACTCCATCTTTGTTAATAATCACATGCAAGAGATGCACAAGTCTCATCATCGTAATGGATATCCAAATTCTGAAAAAGTGATGATGATGATGAGCAACATGGTTCAGTACCCATCATCAGCAACACCAGAAGCTGAGATTGTGAGTTTTCCACAGAGAACAAGAAACAACAACAACAATTTTAGTATGGCGGTGAAATCATCATCATCATCATCAACCGGTTGGGATGTAAAAGAAGCCTTAACATCTAATCACCAATCATGGCCATCACTTTCAGTAGTCAATTATGTGCCAGATTTCAATATGGCCCACCACCACCACCACCAACAACAACAACAACTCATCAACAGCACAACACAATCATCATCATCCCTTGAATCACTCGATTGCCTGCTTTCAGCTACCAACAGCAACACAGACACTACTACTGCTACTACTTCTCTTGAAGAAGATGATAGCATCTCCATCATTCTATCTGACTGCAGAAACTTCTGGAACTTCACTACTAATTATGGAGCCATCACTGCTGCTGCTGCTGCTTCCTCTGCTGAATCTGAAACCAATAATGTTTCCAACAAACAGAACAACATGCAATATCATCATCACCATCATCAGATCAATAATAAGGAGCTCGATGAAACAGTATCTCAAGCTTCAAAGAGGACAATCAATGACCAATATGACCTTATCAAAACTTCTTCTTCTGCTGCTGCAACCACCACCACTGGTCCCTACTTCAGTATCTTCCACAATTCTTCTTCTTCCGCCACTGAAAGCGGCGCCTTCAAGCTTATCAAAGAGAATCCTCTACCAAGATCCAAGAAACCAAGATGGGAGAATAACAACAACAACAACAACAATAAGCATGGTGGTTCATCATCCAACATCAACTTCCAGCAGCCGAATTCATCGCATTCCACCATTGACGAACCAGATCCAGAGGCCATTGCACAGATGAAGGAGATGATATATAGAGCTGCGGCATTTCGGCCTGTGAACTTGGGATTGGAGGTTGCGGAGAAGCCGAAGAGGAAGAACGTGAAGATATCAAGCGATCCTCAAACGGTAGCTGCAAGGCAAAGAAGGGAGAAAATAAGTGAAAGAATTAGGGTTTTGCAGAAGATTGTTCCTGGTGGAAGCAAGATGGACACAGCTTCAATGCTTGATGAAGCTGCTAACTACCTCAAGTTTCTTAGGTCACAGGTCAAAGCTCTTGAAAGCTTAGGGAACAAGCTTGACACCATGAATAATCATAATGTTCCTCCTACCACCACCATTGCTTTCTCTTTCAACCCTTCTTTTCCCATCATGCCATCTTATTTTCCCAACCCTAAACCCTAG 1416 0.4237 MDGLSWDPSSQLAVNNIPMLEGEEDYSIFVNNHMQEMHKSHHRNGYPNSEKVMMMMSNMVQYPSSATPEAEIVSFPQRTRNNNNNFSMAVKSSSSSSTGWDVKEALTSNHQSWPSLSVVNYVPDFNMAHHHHHQQQQQLINSTTQSSSSLESLDCLLSATNSNTDTTTATTSLEEDDSISIILSDCRNFWNFTTNYGAITAAAAASSAESETNNVSNKQNNMQYHHHHHQINNKELDETVSQASKRTINDQYDLIKTSSSAAATTTTGPYFSIFHNSSSSATESGAFKLIKENPLPRSKKPRWENNNNNNNNKHGGSSSNINFQQPNSSHSTIDEPDPEAIAQMKEMIYRAAAFRPVNLGLEVAEKPKRKNVKISSDPQTVAARQRREKISERIRVLQKIVPGGSKMDTASMLDEAANYLKFLRSQVKALESLGNKLDTMNNHNVPPTTTIAFSFNPSFPIMPSYFPNPKP 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01754 471 Pfam Helix-loop-helix DNA-binding domain 384 423 IPR011598 GO:0046983
Adu07g01754 471 PANTHER TRANSCRIPTION FACTOR BHLH87 88 468 - -
Adu07g01754 471 Coils Coil 413 433 - -
Adu07g01754 471 MobiDBLite consensus disorder prediction 300 334 - -
Adu07g01754 471 MobiDBLite consensus disorder prediction 293 335 - -
Adu07g01754 471 Gene3D - 379 445 IPR036638 GO:0046983
Adu07g01754 471 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 374 423 IPR011598 GO:0046983
Adu07g01754 471 CDD bHLH_AtIND_like 375 433 - -
Adu07g01754 471 SMART finulus 380 429 IPR011598 GO:0046983
Adu07g01754 471 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 88 468 IPR045843 GO:0003700|GO:0006355
Adu07g01754 471 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 380 441 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01754 Adu-Chr7 52690699 52692594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01754 134 471 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 47.507 1.20e-82 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu07g01754 HLH 1.5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01754 - - aip:107612801 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g01754 07 52690699 52692594 Adu07g01754 07 52690699 52692594 ECH
Adu07g01754 07 52690699 52692594 Adu09g00373 09 4178123 4180560 PCT