Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01749 ATGACCACCGTACCGGGACAGCTGGTTTGGGAGATCGTGAAGAAGAACAACTGTTTCTTGGTTAAGGAGTTTGGAAGGGGCACTCAGAGCGTTGAGTTCAGCAGAGAAGCCAACAATCTCTACAACCTTAACTCCTTCAAGTACTCTGGTTTGGCAAACAAGAAAACTGTTACTATTCAGCCTGCTGGAAAAGATCAGGCTGTGTTGCTTGCTACAACAAAGACAAAGAAGCAAAACAAGCCGGCTGCATTGCTTCATAAATCTATCATGAAGAAGGAGTTCCCTAGAATGGCAAAAGCAGTGAAAAAACAGGTTGCAGCTAACTACTACAGGCCTGATCTCACCAAGGCAGCTCTTGCAAGGTTGAGTGCTGTCAATAGGAGCCTCAGGGTTGCAAAGTCTGGTGTCAAGAAGAGAAACAGACAGGCTGTTAAGGATGCTCCACCTACTCAGGATGCTCTACCTAGTCAGGATGCTCCATCTGGTCATGATCATGACAAACCTAGTCAGCAATCCACACCTGTTGTCCTTCCAATCCTGTGGCAGCAACACCAGCAGCACCCTAAGTCAGGCCAGGACCAGCAACCAGGAGGACACCGTTTAGACCTCCACTCCAAGTTCCATCAACAGCGGCCCAAAAAAGTCAAGCAACTCTACCGAAGATGA 666 0.479 MTTVPGQLVWEIVKKNNCFLVKEFGRGTQSVEFSREANNLYNLNSFKYSGLANKKTVTIQPAGKDQAVLLATTKTKKQNKPAALLHKSIMKKEFPRMAKAVKKQVAANYYRPDLTKAALARLSAVNRSLRVAKSGVKKRNRQAVKDAPPTQDALPSQDAPSGHDHDKPSQQSTPVVLPILWQQHQQHPKSGQDQQPGGHRLDLHSKFHQQRPKKVKQLYRR 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01749 221 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
Adu07g01749 221 Gene3D - 6 133 - -
Adu07g01749 221 MobiDBLite consensus disorder prediction 166 193 - -
Adu07g01749 221 PANTHER 60S RIBOSOMAL PROTEIN L28 1 145 IPR002672 GO:0003735|GO:0005840|GO:0006412
Adu07g01749 221 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 1 145 - -
Adu07g01749 221 MobiDBLite consensus disorder prediction 206 221 - -
Adu07g01749 221 MobiDBLite consensus disorder prediction 132 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01749 Adu-Chr7 52639476 52643950 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01749 1 143 Cytoplasmic Ribosomal Protein Gene Family AT2G19730 74.825 1.52e-75 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01749 K02903 - gmx:100499921 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00394 09 4417522 4420483 Adu07g01749 07 52639476 52643950 ECH
Adu07g01749 07 52639476 52643950 Adu07g01749 07 52639476 52643950 ECH
Adu07g01749 07 52639476 52643950 Adu09g00394 09 4417522 4420483 PCT