Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01704 ATGCCGACCGCAGACGATGCCGACCGCAGTCTCGTTTCCAGTTTGCTAAATTGCAATTGGTCAATGCTGGGACCTGTTACTCAGCTGCTGGACTCATATTTTCTTCTTGTGCTTCTTCGAGACCCAAATCCAATCCACCAAATGGATCAGAAATTTGATTCTGTGAAAGACCTTTCTCTCATTTCAAAGAAGAACTGGTGCATTAAAGTAAAAATTTTGAGGATGTGGAAGGTTCCGTCATATGAAAAGAGCTACTCGCAACCTTCAATGGAGTTGGTTGTCATTGACAAAGATGGAACTCAGATCCATTTTTTCATCCGGTCTGTCCATTATCGACTTTTTGAACCTATCCTTGAGGAGGGAAAGGTGTTTGTTGTGGGCAACTTCGCAATGGACTCAAACACACAGAAATACAGACCTACCAAGCATAGCATGCGGATCATATTTAAGAGGGACACATTGGTGTCTGGTGCTGATGACATGGATATTCCAATTGAGTCATTTGATTTCGTGGCAACCAAGGAAATCTTATCATCCGTTAAGGATGACTTATATCTTATTGATTTTGTTGGTCTACTGTCCACAAAGAGTGAGTTGATTCCTTTTGAATATAGGAATCGGAAGTCACATTACATGAAAATCGAGCTTGATGATCTAAGTGAGAAACTTTCATGCACCTTGTGGGAAAATTATGCCTCTGAATTGATAACTCTTCTTGATGCGAACAAGGCCACTGAATTTATAATTGTGCTCCAATTTGCCAAGATGAAGTTCTACAATGGTGTTATGACTATAACCAACACAAACTACACCACAAGGCTCATGGTTAATGCTGATCTTGAAGTGGTTAAGAAATTCCGTCAAAAGCTGATTCGACTTGGTAGCAAGCACAGCACCAGCGTTGAAGTTATTGGCCGGGTAGTGAGGCATTCTCCATCTGAAGATTTTCTCAGCCTTACCCCTTATGCTACCATACATCAAATAAAGGAAACTCTTGAGAAATCAACCTTTGTCACATGTGGAACGGTAATTGACATTGACAGGGATCATGCATGGTGGTACAAGGCTTGCAGGCAATGCACCCAGGGACTGGAAGCACTTACTAACCAATTTTATTGTGCAAAGTGCGATGTTTACTCTACAATTTTTGCCCCCAGGTTCTGCATTCAGGTTTGTGTTGGTGATGAGTCAGATACCGCAACTTTTGTTCTATTTGAGAATTGTGCGTCAAAGTTCTTAGGTCTAACTGCCGCTGAGATCCGCACCAGACTGCTTGCTAGGGGATATGGAAGAGACCATTTCCCAAATGAGCTTAATACACTGATTGGGAGGACACTTCTGTTCAAGCTTACTGTTAGGCATGATAGCTTAAATAAATTTCAGCACAATGACTTGGTTGGGTCTGAGAGCATACTCGGCGTCCCTGGATCCACCACCACTCCGAGTCCCAATTCTGATGCAGTTTCTGGTCACGGGGCTGCCCACGTGGTTACACATACTCCTGTTAAGCGGGTTTGCATTAGATCCGGTGGCGACTTCTCATCCCGTGCCACACCCTCTGCCTCCAAGAGTCTCCTCCCTGCCTTTGAGAGCTGCGTCCCAGGGAATGTCACCAACCCTGATGCAGGGGACATATGA 1638 0.4396 MPTADDADRSLVSSLLNCNWSMLGPVTQLLDSYFLLVLLRDPNPIHQMDQKFDSVKDLSLISKKNWCIKVKILRMWKVPSYEKSYSQPSMELVVIDKDGTQIHFFIRSVHYRLFEPILEEGKVFVVGNFAMDSNTQKYRPTKHSMRIIFKRDTLVSGADDMDIPIESFDFVATKEILSSVKDDLYLIDFVGLLSTKSELIPFEYRNRKSHYMKIELDDLSEKLSCTLWENYASELITLLDANKATEFIIVLQFAKMKFYNGVMTITNTNYTTRLMVNADLEVVKKFRQKLIRLGSKHSTSVEVIGRVVRHSPSEDFLSLTPYATIHQIKETLEKSTFVTCGTVIDIDRDHAWWYKACRQCTQGLEALTNQFYCAKCDVYSTIFAPRFCIQVCVGDESDTATFVLFENCASKFLGLTAAEIRTRLLARGYGRDHFPNELNTLIGRTLLFKLTVRHDSLNKFQHNDLVGSESILGVPGSTTTPSPNSDAVSGHGAAHVVTHTPVKRVCIRSGGDFSSRATPSASKSLLPAFESCVPGNVTNPDAGDI 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01704 545 Gene3D - 50 157 IPR012340 -
Adu07g01704 545 PANTHER REPLICATION FACTOR A 1, RFA1 62 458 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Adu07g01704 545 CDD RPA1_DBD_A_like 67 155 - -
Adu07g01704 545 SUPERFAMILY Nucleic acid-binding proteins 51 160 IPR012340 -
Adu07g01704 545 PANTHER REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT B-LIKE 62 458 - -
Adu07g01704 545 Pfam Replication factor-A C terminal domain 339 461 IPR013955 -
Adu07g01704 545 SUPERFAMILY Nucleic acid-binding proteins 320 461 IPR012340 -
Adu07g01704 545 Gene3D - 317 466 IPR012340 -
Adu07g01704 545 CDD RPA1_DBD_B_like 188 288 - -
Adu07g01704 545 Pfam Domain of unknown function DUF223 91 173 IPR003871 -
Adu07g01704 545 CDD RPA1_DBD_C 325 458 IPR013955 -
Adu07g01704 545 Gene3D - 161 301 IPR012340 -
Adu07g01704 545 SUPERFAMILY Nucleic acid-binding proteins 168 288 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01704 Adu-Chr7 50194410 50198030 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01704 65 458 Core DNA Replication Machinery Family AT5G08020 21.446 6.68e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01704 - - adu:107458794 1008.82