Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01679 ATGGAGCTTGGATTAAGCTTAGGAGACTCTTCAAGGCCTTTCGTTGGGTTCATGGAAAAGCCTCGTAGTGAACCTTCTTCCAACCAACTTGGATTAGGCTTCACCACCACCACCTTGTCCATTGGACCAATCATCACTACTAAAAGACAAAGGGATCAACAAGAACAACAACTACAACAACAGGAACATGAAGATAAAGAAGAAGCAAAACCAAAGGACGACAACCCTCATCTTCATCAGCTTGATTTCCTTCCTCAGCTCTCTCTCCCATGGCACCCTTCTGAAAACGGTAGAGTGTCAAAAGGTTTGGACGTAAACGTGCTGCCGCTGACAACCGTGGCGGCGACGGCGGCGGCGGGGGCAGATGATGAGGTTGAGGAAGGGGAGGCGCTGTCATCGTCCCCGAATAGCGCAGCGTCTTCCTTTCAGACGGATCTATGCATATTTGGTGGCGGTGGTAGTTACAGCGGTGGTTCGGGAGGAAACTATTACAACTACGGTGGGAAAAGAGATCACTCTGATGGCGAGGGTTATGATCACCAAAGGGATTGTTCAAGAGCAAGCGACGAAGATGAAAACTGCGGCCGTGGCGGCGGCACAAGGAAGAAACTCAGGCTCTCCAAGGAACAATCCGCTTACCTTGAGGAGAGCTTCAAAGAGCACAACACTCTTAACCCTAAACAAAAGCTTGCTCTTGCTAAACAACTCAATCTTCGGCCTCGCCAAGTTGAAGTCTGGTTTCAAAACAGAAGAGCAAGGACAAAGCTGAAGCAAACTGAGGTGGATTGTGAGTATTTGAAGAGGTGCTGTGAGACACTAACAGAAGAGAACAGAAAGCTTCACAAGGAGCTTCAAGAATTGAGGGCTCTAAAGACTTCAAACCCATTCTACATGCAGTTACCGGCAACAACGTTGACCATGTGCCCTTCTTGTGAGCGTGTTGCTACAAATCCTTCTTCGAATAATTCTCCCTCACCAACTCCTCCTTCTAATAATAATTCTAACAATAATAATATTATTAATAGTAATAATGACTCAAATTCAAAGGTCATTGGATTCCCTCTTGGGAAACACACGTTTCATCCTTTTGCTCACACCACACAACCGCAACAACATCATCCACATCAGTCCACAGAATCGTGA 1143 0.4646 MELGLSLGDSSRPFVGFMEKPRSEPSSNQLGLGFTTTTLSIGPIITTKRQRDQQEQQLQQQEHEDKEEAKPKDDNPHLHQLDFLPQLSLPWHPSENGRVSKGLDVNVLPLTTVAATAAAGADDEVEEGEALSSSPNSAASSFQTDLCIFGGGGSYSGGSGGNYYNYGGKRDHSDGEGYDHQRDCSRASDEDENCGRGGGTRKKLRLSKEQSAYLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRKLHKELQELRALKTSNPFYMQLPATTLTMCPSCERVATNPSSNNSPSPTPPSNNNSNNNNIINSNNDSNSKVIGFPLGKHTFHPFAHTTQPQQHHPHQSTES 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01679 380 MobiDBLite consensus disorder prediction 363 380 - -
Adu07g01679 380 MobiDBLite consensus disorder prediction 1 35 - -
Adu07g01679 380 MobiDBLite consensus disorder prediction 119 139 - -
Adu07g01679 380 MobiDBLite consensus disorder prediction 314 350 - -
Adu07g01679 380 MobiDBLite consensus disorder prediction 314 380 - -
Adu07g01679 380 SUPERFAMILY Homeodomain-like 188 258 IPR009057 -
Adu07g01679 380 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 1 341 - -
Adu07g01679 380 PANTHER - 1 341 - -
Adu07g01679 380 Coils Coil 44 64 - -
Adu07g01679 380 CDD homeodomain 201 258 IPR001356 GO:0003677
Adu07g01679 380 SMART HOX_1 199 261 IPR001356 GO:0003677
Adu07g01679 380 MobiDBLite consensus disorder prediction 172 201 - -
Adu07g01679 380 Gene3D - 205 255 - -
Adu07g01679 380 SMART halz 257 300 IPR003106 GO:0006355|GO:0043565
Adu07g01679 380 MobiDBLite consensus disorder prediction 55 79 - -
Adu07g01679 380 Pfam Homeodomain 201 255 IPR001356 GO:0003677
Adu07g01679 380 ProSitePatterns 'Homeobox' domain signature. 232 255 IPR017970 GO:0000981|GO:0006355
Adu07g01679 380 ProSiteProfiles 'Homeobox' domain profile. 197 257 IPR001356 GO:0003677
Adu07g01679 380 Coils Coil 270 293 - -
Adu07g01679 380 MobiDBLite consensus disorder prediction 47 79 - -
Adu07g01679 380 Pfam Homeobox associated leucine zipper 257 291 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01679 Adu-Chr7 47769492 47773184 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01679 184 314 Homeobox Transcription Factor Family AT4G37790 74.809 8.40e-66 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Adu07g01679 Homeodomain 2.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01679 K09338 - gmx:100778742 404.831