Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01637 ATGTTCATTGATGCTGGTGCATTGAGGAAATATTCTCCCATTCATGAAGAGAGACAATTTATTTGTCATTATGAGGGGTGTGGAAAGAAATTTCTTGAAAGGTCAAAGTTGAAAAGACATTTTCTCATTCACACAAGGGAGAGCAATTTTATATGTCCTCGTGAAGGCTACGGTAAGGAACCGCCGCTGATCACGGCTAACACAGTGCTTTCTATTCTTGATGTGGACTATCCTGTGGATAAAGTATCCTGTTATGTATCTGATGATGGTGCTTACTCGATTGAGCTGCGAGCGCCTGAGTTCTACTTCTCTCCGAAGATTGACTACCTCAAAGACAAAATTAAACCTTCTTTTGTGAAGGAATGTAGAGCTATAAAGGTTTTCCTTGGACACACGGGTGCACATGACATAGAAGGGAATGAACTTCCTAGGCTTGTGTATCTTTCCAAAGAAAAAAGGCCAGGTTACCAACATCACAGAAAGGCTGGTGCTGAAAATGCATTGGTGAGGGTCTTAGGAGTTCTCACAAATGCTCCCTCATTCTCAATCTTGATTGTGATCATTATGTTAACAATAGCAAGGCTGTTCGGGAAGCAATGTGTTTTCTTATGGATCCAAAAGTTCGTAGAGATGTCTATTATGTGCAGTTCCCGTAGAAATTTGACGGTTAACATGAAAGGACTTGATGGAATTCAAGGACCTATATGTATGTGGGAACTGGATGTGTTTTTAATAGACAAGCTCTTTATGGTTATAGTCCACCTTCCATGCCCAACTTACCAAGATCTTCTTCATCATGCTGCTGCTGCTGTCCCTCAAAGAAGGCCGAAAAAGATGTATCTGAGCTTTATAAATATGCAAAGAGGGAAGAACTTAATGCTTCTATTTTGA 891 0.404 MFIDAGALRKYSPIHEERQFICHYEGCGKKFLERSKLKRHFLIHTRESNFICPREGYGKEPPLITANTVLSILDVDYPVDKVSCYVSDDGAYSIELRAPEFYFSPKIDYLKDKIKPSFVKECRAIKVFLGHTGAHDIEGNELPRLVYLSKEKRPGYQHHRKAGAENALVRVLGVLTNAPSFSILIVIIMLTIARLFGKQCVFLWIQKFVEMSIMCSSRRNLTVNMKGLDGIQGPICMWELDVFLIDKLFMVIVHLPCPTYQDLLHHAAAAVPQRRPKKMYLSFINMQRGKNLMLLF 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01637 296 Gene3D Classic Zinc Finger 17 50 - -
Adu07g01637 296 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 8 [UDP-FORMING] 58 126 - -
Adu07g01637 296 ProSiteProfiles Zinc finger C2H2 type domain profile. 20 49 IPR013087 -
Adu07g01637 296 ProSitePatterns Zinc finger C2H2 type domain signature. 22 44 IPR013087 -
Adu07g01637 296 SUPERFAMILY beta-beta-alpha zinc fingers 8 56 IPR036236 -
Adu07g01637 296 Pfam Cellulose synthase 59 91 IPR005150 GO:0016020|GO:0016760|GO:0030244
Adu07g01637 296 Pfam Cellulose synthase 125 236 IPR005150 GO:0016020|GO:0016760|GO:0030244
Adu07g01637 296 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 8 [UDP-FORMING] 125 238 - -
Adu07g01637 296 SMART c2h2final6 20 44 IPR013087 -
Adu07g01637 296 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 125 238 - -
Adu07g01637 296 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 58 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01637 Adu-Chr7 45390078 45393113 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01637 10 249 Glycosyltransferase AT4G18780 41.463 3.34e-56 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu07g01637 Cellulose_synt 9.2e-22 CL0110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01637 K10999 - han:110937161 200.29