Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01612 ATGGCCACTTCCGCCGCCACAAATGCCACAGTGTCGCGCCAGCTCTCGCAGAAGGAGCAAGACATCCAAATGATGCTCGCAGACGAGGTTCATCTCGGAACCAAAAACTGTGACTTCCAGATGGAACGCTACGTTTTCAAGCACCGCAATGATGGTCTAGATACTCTTTGCACTTCAATGAGTTTAGCATTTTTTCTTCTATTTATCTTTTCGTGTCCCATTAAGGAAGGTGCTCTTGGAAATATTCCGACCATTGCCTTCTGCGACACTGATTCTTCGATGCGCTATGTTGATGTTGGCATTCCTACTATTCGTCCAAGGCTTAAGTGGGATGTGATGGTGGATTTATTCTTCTATAGAGAACCTAAAGAGGCCAAGCAACAAGAGGAACAGGAATTACCAGCTGCCTCAGAATATGCCATTCAAGATTTTGGTGCTGCTGGCATTGCCGGCTTCCCTGCAGCTGATGGGGAATGGGGGAtggtgcacgaaattgtgatacacaattccgatacaactaaccagcaagtgcactag 537 0.4227 MATSAATNATVSRQLSQKEQDIQMMLADEVHLGTKNCDFQMERYVFKHRNDGLDTLCTSMSLAFFLLFIFSCPIKEGALGNIPTIAFCDTDSSMRYVDVGIPTIRPRLKWDVMVDLFFYREPKEAKQQEEQELPAASEYAIQDFGAAGIAGFPAADGEWGMVHEIVIHNSDTTNQQVH 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01612 178 PANTHER 40S RIBOSOMAL PROTEIN SA 73 102 - -
Adu07g01612 178 Gene3D - 21 62 - -
Adu07g01612 178 Gene3D - 69 134 - -
Adu07g01612 178 PANTHER 40S RIBOSOMAL PROTEIN SA 6 55 - -
Adu07g01612 178 PANTHER 40S RIBOSOMAL PROTEIN SA 103 148 - -
Adu07g01612 178 SUPERFAMILY Ribosomal protein S2 17 103 IPR023591 -
Adu07g01612 178 PANTHER 40S RIBOSOMAL PROTEIN SA 6 55 IPR005707 GO:0003735|GO:0006412|GO:0015935
Adu07g01612 178 PANTHER 40S RIBOSOMAL PROTEIN SA 103 148 IPR005707 GO:0003735|GO:0006412|GO:0015935
Adu07g01612 178 PANTHER 40S RIBOSOMAL PROTEIN SA 73 102 IPR005707 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01612 Adu-Chr7 43636987 43638952 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01612 9 53 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 71.111 8.25e-18 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01612 K02998 - gmx:100818292 124.79