Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01605 ATGACTATACCATCGGCACCGCCGCCCTTTGCCTTAACGGTGCTCTGCGCTGGCTGCAGCACGCCACTGACCACGTCGATGAACGTCGTGGAGTTCGTTTGCCCTGCTTGCCAAATGCCGCAGCGGTTGCCGCCGATGCCATTACCACCACTTCCACCACCATCAGTATCACCGCCACAATCGCAACCACCAGTACCGCCGGCTGGAGCGGCTGCGAAGAAGCGGAAACACGCCACGGAGACTAGCAAGCTACGCAAGAAGCAGAACGGCGGCTCTGGTTCAAGTAAGGTTGAGGTTCCATGCAGATGCTGCAAAGAGGTTTTTTCCGTTCCAGCTAGTCTCACGAAGTTCGCTTGCCCTAAGTGTGGTGTTGAGAACCCCGTCGAGACCGAAGAAATCAATGAGCTAGCGGTTGAGGTTGAACGTGAGGAAGATGAAGGCGGAACAGCAGGAGAAACATTTACAGATTATCGGCCAGCAAAAGTATCTATGGGACCTCCGCACCCAGATCCTGTTGTTGAGACTTCTTCCTTGTCTGCAGTGCAGTCACCTGAACCTACTTATGATCCAATACTTAAAGATTATTTGGAAAGTTCAAAGGCTTTGTCATGCCTGCAGATAGAGACATTGGTCTATGCTTGTCAGAGGCATCTTCTACACCTTCCAGACGGCACAAGGGCAGGATTTTTTATTGGGGATGGAGCTGGTGTTGGTAAGGGCCGCTCAGTTGCTGGGCTTATTTGGGAGAACTGGCAGCAAGGACGGGAAAAGGCGTTATGGATTTCTGTTGGTTCAGACTTGAAGTTTGATGCCAGAAGAGACTTGGATGATATGGGTGCAACTTGTGTTAAAGTGCATGCTTTGAACAAACTGCCTTATTCTAAGCTTTCTTCGAAGTCTGTTGGAGTCAAGGATGGGGTTGTTTTCTCAACTTACAGTAGCCTCATAGCATCCTCTGATAAGGGTCAATCTCGTCTCAAACAACTTGTGCAGTGGTGTGGGCCAAAGTTTGATGGTCTTATAATATTCGATGAGTGTCACAAAGCGAAAAACTTGATGCCGGAAGCTAAAGGTGGTATGCAGCCAACACAAACTGGCAAAGCAGTGCTTGATATACAGTCTCAACTACCCGAAGCTCGTGTTGTTTATTGTTCTGCCACTGGTGCATCTGAACCTCGCAACATGGCTTATATGGTTCGACTTGGCCTTTGGGGTGATGGAACTTCTTTCTGTGATTTCAAGGAATTTTTAGGTGCACTTGACAAAGGGGGTGTAGGAGCTCTAGAACTAGTTGCCATGGACATGAAAGCAAGGGGAATGTATTTATGTCGGACCCTTAGCTACAAGGGTGCTGACTTTGAAGTTATTGAAGCACCATTAGAGGATAAGATGATGGACATATATGAAAAAGCTGCAAAATTTTGGTTGGAACTGCGTGTGGATTTACTGTCTACAACTTCCAATGCCTTTTTAAATGTGAAATTTGATTCACGTACACTGTGGAGATTATACTGGTCATGCCACCAGCGTTTCTTTAGACACATGTGTTTGTCCGCTAAAGTACCTGCTACTGTGAGACTAGTGAAGCAAGCATTGATGGAAGATAAGTGTGTAGTTATAGGACTGCAGAGTACTGGGGAAGCCAGGACTGAAGGAGCTGTGGCAAAATACGGTTTTGAACTTGATGATTTCATTTCTGGGCCTGAAGGGTTGCTGGAAAAATTTGTAGATGACTGTTTTCCATTGCCAGAGAACCCCGAACTTCATGAAAAGGATGCATTGCTTGATCTCGAGGGGATGGGGCACTCAACGAGTCCTTGTGTATCAGGAAAAGTAAAGGGCAGGAACATAGCTAAGGTGCATCCTTCTAGTAATATTGAAAGTTACGAAGAATCTGAAACTGACACTGATCCTGAAATGGATGAATCTGATTATGAACCAGAAGGTGAAGAGAGTGCTGCCTCTGCTCTTGAATCTAGTGACTCTGATTATGATGAGCTTCAGACATGTGAATTATGCAGCTTAGAGGAGGAAAGGCATAATTTGCTTTCATGCTCCGGCTGTGGTAAACTGGTCCATCAAGAATGCTTAAGTCCCCCAATTCACAATTTAACTCCAGAAAAATGGTTATGCACTGTGTGCAAAGGAAGAACAAATGACATCCAACCAGGTCCTGACTACCTAACTGAACTCAAGAAGAGGTTTGGCACATGTTTTAACGAATTCTGTAACTGTGGTTTTAATGTGATTATTGTTCTGATCAATCCCTTGGATGATATTATTGATCAGTTAGGAGGCACTGAAAAAGTTGCTGAAATCACAGGAAGAAAAGGCAGGCTTGTGAGGGCCCCTTCGGGAAAGGGTGTAATTTACGAGCCTCGTAACAAAAAAGATATCAGTATGGAGATGGTAAACATGCATGAAAAGAAGCTTTTTTTGGATGCTAAGAAGTTTGTAGCTATTATATCTGAAGCCGGATCTGCGGGTTTTTCATTGCATGCAGATAGAAGGGTTATTAATCAGAAAAGAAGGGTTCATATAACTTTAGAACTTCCTTGGAGTGCTGACAAAGCAATTCAGCAGTTTGGAAGAACTCATCGATCAAATCAAGCTTCAGCTCCAGAATACAGGGTACTCTTTAGTAACCTTGGTGGTGAACGAAGGTTTGCATCTGTTGTTGCTAAAAGATTAGAATCTCTTGGTGCTTTGACTCAGGGGGATCGCAGGGCTGGACCTTCATTAAGTGCTTACAATTATGATAGTAGTTATGGAAAGAGGGCTCTAATGATTATGTACGAAGGAATATTGGAACAGGATTCTCTTCCTGTTGTTCCTCCTGGATGTTTATCTGACAATCCTGTTACAATCAATGAATTTATTATGGAAGCAAAATCTGCTCTTCTATCTGTTGGAATAGTTAAAGGATATGAGGAACATTCTGGAAGTTTATCTGGCTACATTAGTGATAATGATATGCAAGATGTTCGGCGATTCCTCAATCGGCTTCTAGGACTTCCTCCTGATATTCAGAATAGGCTTTTTGAATTATTTGCGAGCATATTTGATCATCTCATTCAGGATGCTCGCATTGAAGGTAACCTTGATACAGGCATTGTGGATATGAAGGCTAATGTTGTAGAACTACAAGGGACTCCAAAGACAGTTTATATTGATCCAGTGACGGGGGCTTCAACGGTTCTGTTCACTTTCATCTTGGATAGGGGGACCACATGGCAGCTGGCAACCTCCATGCTGAATGAGAAGCAGAAGGGTGGGCTTGGATCAGTCAATGATGGTTTCTACGAGTCTAAGAGGGAGTGGTTAGGAAGGCGTCATTTCATTTTAGCATTTGAAAGTTCTGTTTCGAATATGTATAAGATAGTTCGCCCTACTGTTGGAGAATCCTTTCGGGACATGCATCTGTCAGAATTAAAAAGGAAATATAAAAAAGTTTCATGTTTAAAGAATGCTCAAAAAGGATGGGAAGTGGAATATAATGTTTCATCTAAACAGTGCATGCACGGTCCCAAATGTAAGCTTGGCAACTTCTGTACTGTTGGCCGAAGTCGGCAGGAAGTAAATATCTTGGGTGGTGCCATTCTTCCTCTTTGGCGAGCTATTGAGAAGGCCCTTTCTAATCAGTTGCGCCGAAACCATAGGAGGCTACGTGTTGTTCGCATTGAGACTTCTGCTGATAACCAGCATATAGTTGGCGTTCTTGTTCCTAATGCAGCTGTTAAATCCGTCCTTCAAGGTTTGGAATGGGTTCCAGCTGATGATAATTGA 3786 0.4398 MTIPSAPPPFALTVLCAGCSTPLTTSMNVVEFVCPACQMPQRLPPMPLPPLPPPSVSPPQSQPPVPPAGAAAKKRKHATETSKLRKKQNGGSGSSKVEVPCRCCKEVFSVPASLTKFACPKCGVENPVETEEINELAVEVEREEDEGGTAGETFTDYRPAKVSMGPPHPDPVVETSSLSAVQSPEPTYDPILKDYLESSKALSCLQIETLVYACQRHLLHLPDGTRAGFFIGDGAGVGKGRSVAGLIWENWQQGREKALWISVGSDLKFDARRDLDDMGATCVKVHALNKLPYSKLSSKSVGVKDGVVFSTYSSLIASSDKGQSRLKQLVQWCGPKFDGLIIFDECHKAKNLMPEAKGGMQPTQTGKAVLDIQSQLPEARVVYCSATGASEPRNMAYMVRLGLWGDGTSFCDFKEFLGALDKGGVGALELVAMDMKARGMYLCRTLSYKGADFEVIEAPLEDKMMDIYEKAAKFWLELRVDLLSTTSNAFLNVKFDSRTLWRLYWSCHQRFFRHMCLSAKVPATVRLVKQALMEDKCVVIGLQSTGEARTEGAVAKYGFELDDFISGPEGLLEKFVDDCFPLPENPELHEKDALLDLEGMGHSTSPCVSGKVKGRNIAKVHPSSNIESYEESETDTDPEMDESDYEPEGEESAASALESSDSDYDELQTCELCSLEEERHNLLSCSGCGKLVHQECLSPPIHNLTPEKWLCTVCKGRTNDIQPGPDYLTELKKRFGTCFNEFCNCGFNVIIVLINPLDDIIDQLGGTEKVAEITGRKGRLVRAPSGKGVIYEPRNKKDISMEMVNMHEKKLFLDAKKFVAIISEAGSAGFSLHADRRVINQKRRVHITLELPWSADKAIQQFGRTHRSNQASAPEYRVLFSNLGGERRFASVVAKRLESLGALTQGDRRAGPSLSAYNYDSSYGKRALMIMYEGILEQDSLPVVPPGCLSDNPVTINEFIMEAKSALLSVGIVKGYEEHSGSLSGYISDNDMQDVRRFLNRLLGLPPDIQNRLFELFASIFDHLIQDARIEGNLDTGIVDMKANVVELQGTPKTVYIDPVTGASTVLFTFILDRGTTWQLATSMLNEKQKGGLGSVNDGFYESKREWLGRRHFILAFESSVSNMYKIVRPTVGESFRDMHLSELKRKYKKVSCLKNAQKGWEVEYNVSSKQCMHGPKCKLGNFCTVGRSRQEVNILGGAILPLWRAIEKALSNQLRRNHRRLRVVRIETSADNQHIVGVLVPNAAVKSVLQGLEWVPADDN 1261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01605 1261 MobiDBLite consensus disorder prediction 139 159 - -
Adu07g01605 1261 ProSiteProfiles Zinc finger PHD-type profile. 667 717 IPR019787 -
Adu07g01605 1261 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 811 915 IPR027417 -
Adu07g01605 1261 PANTHER OS08G0223700 PROTEIN 130 1257 - -
Adu07g01605 1261 PANTHER OS08G0223700 PROTEIN 9 128 - -
Adu07g01605 1261 Pfam PHD-finger 670 715 IPR019787 -
Adu07g01605 1261 Pfam C-terminal domain on Strawberry notch homologue 755 1040 IPR026937 -
Adu07g01605 1261 MobiDBLite consensus disorder prediction 620 663 - -
Adu07g01605 1261 Gene3D - 196 400 IPR027417 -
Adu07g01605 1261 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 653 734 IPR013083 -
Adu07g01605 1261 MobiDBLite consensus disorder prediction 48 97 - -
Adu07g01605 1261 PANTHER STRAWBERRY NOTCH-RELATED 130 1257 IPR026741 GO:0006355
Adu07g01605 1261 PANTHER STRAWBERRY NOTCH-RELATED 9 128 IPR026741 GO:0006355
Adu07g01605 1261 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 412 IPR027417 -
Adu07g01605 1261 MobiDBLite consensus disorder prediction 630 651 - -
Adu07g01605 1261 SMART PHD_3 669 715 IPR001965 -
Adu07g01605 1261 MobiDBLite consensus disorder prediction 48 66 - -
Adu07g01605 1261 Pfam P-loop containing NTP hydrolase pore-1 167 469 IPR039187 -
Adu07g01605 1261 ProSitePatterns Zinc finger PHD-type signature. 670 714 IPR019786 -
Adu07g01605 1261 SUPERFAMILY FYVE/PHD zinc finger 658 717 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01605 Adu-Chr7 42814507 42838713 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Adu07g01605 AAA_34 8.6e-131 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01605 - - ahf:112702977 2361.26