Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01590 ATGATTCAGTATGGTAAAGATTATGAATTTGATACTCCAGTGAAGCTCCTAGAGAAACATCTACATGCTATGGCACAATTTGTTATTGCTTTCAATGATAAGCCTGTGAAGAATTTGAAGGGCTTGGTCACCATGGTTGAGAACTGTGATGATGAGTTTCTAAAGTTTGATCTGGAATACCAACAGGATGTGACAGCAACTAAAAGAAATGAATTTGAGGATTATTTTTTGAAGCGAGAGTTGCTCATGGGAATATATGAGAAGGGTTTTGAAAGGCCTTCTCCTATCCAAGAAGAAAGCATTCCAATTGCTCTTACTGGTAGTGACATTCTTGCAAGGGCTAAAAATGGGACAGGCAAAACAGCTGCATTTTACATTCCTGCATTGGAAAAAAATGACCAGAAATAA 408 0.375 MIQYGKDYEFDTPVKLLEKHLHAMAQFVIAFNDKPVKNLKGLVTMVENCDDEFLKFDLEYQQDVTATKRNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFYIPALEKNDQK 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01590 135 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 6 61 134 - -
Adu07g01590 135 Pfam DEAD/DEAH box helicase 95 131 IPR011545 GO:0003676|GO:0005524
Adu07g01590 135 Gene3D - 11 73 IPR046449 -
Adu07g01590 135 Gene3D - 74 135 IPR027417 -
Adu07g01590 135 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 70 98 IPR014014 GO:0003724
Adu07g01590 135 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 131 IPR027417 -
Adu07g01590 135 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 61 134 - -
Adu07g01590 135 Pfam PDZ domain 28 64 IPR041517 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01590 Adu-Chr7 40302999 40305034 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01590 72 131 Eukaryotic Initiation Factors Gene Family AT5G11200 48.333 9.15e-14 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01590 K12614 - ahf:112717194 241.121