Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01578 ATGTCGGAAATATTCCATGCTGGTGGAGATGTTGTAAGTAGAAATCTCAAGCGCAAGTTAGAGGAGCCACCAGCCGCGGACCATGACTCAGAGGTGTTACTTTCTTTGAGTCTTGGCCGCAACAACAATAACATGGAAACTGGCGACTCATCCTCCAATTTCACATTCAAATCCTTGAAAACTGCTGAAAACCAGACGAAGCAAGAACGCTTGTTTCCTTGCAAGTTTTGCAACAAGAAATTCGCCAGCTCTCAAGCATTAGGCGGACATCAAAATGCTCATAAGCGCGAGAGAGTCCTCTCAAAAATGGACAAAATGTTTAACAGGGGAACATTTGCGCTTGATGCTAGTCATCAATTATGTGCATACCCAACAACCATGACAAATTATCTACCCTACCGTGGCTCAAACTCAATACCTTTGTATCAAGGTGCACATATGCACCACCACATACTTCATATGCCTTGCACCATGCCTGGTTTTCGTTCAGGATCATCTAGCTATGGAAACCAAGGCTTACGCAACATTCCTCTGAATTCTCGCCACCACGGCCACCACCGAGATGCTGGATTTGGTTTTGGAATTACTCAACTTCCTTCATCGAGAGAAGTTCCGGGTGATAGAAGTTCTATGGTTCATGCTAATCTCGGTAGCCTTCTTAGAAATAACTAA 672 0.442 MSEIFHAGGDVVSRNLKRKLEEPPAADHDSEVLLSLSLGRNNNNMETGDSSSNFTFKSLKTAENQTKQERLFPCKFCNKKFASSQALGGHQNAHKRERVLSKMDKMFNRGTFALDASHQLCAYPTTMTNYLPYRGSNSIPLYQGAHMHHHILHMPCTMPGFRSGSSSYGNQGLRNIPLNSRHHGHHRDAGFGFGITQLPSSREVPGDRSSMVHANLGSLLRNN 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01578 223 ProSiteProfiles Zinc finger C2H2 type domain profile. 72 99 IPR013087 -
Adu07g01578 223 PANTHER C2H2-TYPE ZINC FINGER PROTEIN 1 190 - -
Adu07g01578 223 PANTHER ZINC FINGER PROTEIN JAGGED 1 190 IPR045320 GO:0003700
Adu07g01578 223 ProSitePatterns Zinc finger C2H2 type domain signature. 74 94 IPR013087 -
Adu07g01578 223 SUPERFAMILY beta-beta-alpha zinc fingers 68 99 IPR036236 -
Adu07g01578 223 Pfam C2H2-type zinc finger 72 96 - -
Adu07g01578 223 Gene3D Classic Zinc Finger 46 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01578 Adu-Chr7 39245948 39246619 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01578 70 138 C2H2 Transcription Factor Family AT5G14010 46.479 1.86e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01578 - - adu:107458588 460.685