Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01565 ATGGCTTATTCTTCTCACTACCCGACTGCTCCTATGATGGCATCTGGTACACCTGCTGTAGTTGTGCCTTCACCGACGCAGTCTCCAACCGCTTTTTCCAATTCCCCGCACCAGCTTGCATACCAGCAAGCGCAACACTTCCATCACCAGCAACAGCAGCAACAGCAGCAGCAGCTTCAACTGTTCTGGGCAAACCAAATGCAAGAAATTGAGCAAACAATTGACTTTAAGAACCACAGCCTCCCCCTTGCTCGCATTAAAAAGATCATGAAAGCCGATGAAGATGTCCGGATGATTTCAGCAGAAGCTCCAGTAATATTCGCAAAAGCATGTGAAATGTTCATCCTGGAGTTGACTTTGCGATCTTGGATCCACACCGAAGAGAACAAGAGGAGAACTCTGCAAAAGAATGATATAGCAGCTGCTATTTCGAGAAATGATGTTTTTGATTTCTTGGTTGATATCATTCCAAGAGATGAGTTGAAAGAGGAGGGACTCGGAATAGCAAAGGCTACTATTCCAATAGTGGGTTCTCCGGCTGATATGCCATATTATTATGTCTCTCCGCAGCACCCTGTAGGGCCTCCAGGGATGATAATGGGAAAGCCAGTTGATCAAGCAGCACTGTATTCCACACAGCAGCCTCGAGCTCCGATGGCTTTCATGCCATGGCCGCAGGCGCCCTCGCAACAGCAGCCACCCTAA 705 0.4794 MAYSSHYPTAPMMASGTPAVVVPSPTQSPTAFSNSPHQLAYQQAQHFHHQQQQQQQQQLQLFWANQMQEIEQTIDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRNDVFDFLVDIIPRDELKEEGLGIAKATIPIVGSPADMPYYYVSPQHPVGPPGMIMGKPVDQAALYSTQQPRAPMAFMPWPQAPSQQQPP 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01565 234 Gene3D Histone, subunit A 41 158 IPR009072 GO:0046982
Adu07g01565 234 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 5 233 - -
Adu07g01565 234 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 5 233 - -
Adu07g01565 234 SUPERFAMILY Histone-fold 37 152 IPR009072 GO:0046982
Adu07g01565 234 Pfam Core histone H2A/H2B/H3/H4 33 143 IPR007125 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01565 Adu-Chr7 37889017 37889721 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01565 59 190 CCAAT-HAP5 Transcription Factor Family AT1G56170 87.218 2.15e-81 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Adu07g01565 CBFD_NFYB_HMF 1.8e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01565 K08066 - gmx:100799981 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g01565 07 37889017 37889721 Adu07g01565 07 37889017 37889721 ECH