Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01558 ATGTCATGGCCCTCACGTATGGTACTGGAGCTGGGGACTGACAGGTCTATATACTCCTCAGAGGGTTCAAAGTGCATTGGACTCAAGAAATCTTTGGTCTTCTACAAAGGCAGAGCTGCTAAAGGTGTTAAAACTGATTGGATGATGCATGAGTTTAGGCTCCCTTCTCTTGTTGACTCTTCATCATCTGACAAGACCACTATTCATGTTAATGACTCTTGGGCAATCTGCAGAATATTCAAGAAAACAAATGCTACAGCTCAAAGAGCACTATCTCACTCTTGGATTTCTACCTTACATGAAACACCAACCACCACTACCAATGATATAGATCACATATTCCAATTTCGTTCATTTAACATGCCAACAATGATGGCAAAGAAAACTAGCTTCATGACCCAGTTTTGCACTAACTACACTAGTGACACACAAATCCAAACTGATGAAGTAGGGTGGAATAATGTACATGCAAACTGA 477 0.4067 MSWPSRMVLELGTDRSIYSSEGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLVDSSSSDKTTIHVNDSWAICRIFKKTNATAQRALSHSWISTLHETPTTTTNDIDHIFQFRSFNMPTMMAKKTSFMTQFCTNYTSDTQIQTDEVGWNNVHAN 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01558 158 ProSiteProfiles NAC domain profile. 1 82 IPR003441 GO:0003677|GO:0006355
Adu07g01558 158 PANTHER PROTEIN FEZ ISOFORM X1 12 130 - -
Adu07g01558 158 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 130 - -
Adu07g01558 158 SUPERFAMILY NAC domain 11 82 IPR036093 GO:0003677|GO:0006355
Adu07g01558 158 Pfam No apical meristem (NAM) protein 12 54 IPR003441 GO:0003677|GO:0006355
Adu07g01558 158 Gene3D NAC domain 9 87 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01558 Adu-Chr7 37364194 37364852 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01558 12 108 NAC Transcription Factor Family AT1G26870 71.287 2.30e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu07g01558 NAM 4.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01558 - - adu:107480451 300.056