Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01504 ATGCAGTTAGGTCAATTACAGGGCTGGGTCTTCGGTCTTAGTTTACTGGGGATAATTCCTCTGGTAGAGCGGCTCGGTTATGCCACGGAGCAACTTGCATTTTACACTGGAGATACAGTTGGGGGTCTTTTAAATGCTACATTTAGAAATGCAACAGAATTAATAATCTCGTTATATGCCCTGAAAAGTGGATTGACACGAGTAGTCCAGCTTTCATTGCTGGGTTCAATTTTGTCAAACATGTTGCTTGTGCTTGGATGTGCATTCTTAAGTGGTGGTATTGTTTTCAGCAAGAAGGAACAAGTATTTAACAAGGCAGCTGCTACGGTGAATTCAGGATTGCTGCTTATGGCAGTTATGGGCCTACTTTTTCCTGCTGTTCTTCATTATACACGAACTGAGGTGCACTTCGGGAAGTCAGAACTGGCGCTTTCAAGATTCAGCAGCTGTGTCATGCTTGTGGCCTATGCTGCATACTTATTTTTCCAGTTGAGAAGTCAAAGTGGTCTCTATATCTCTGCGAATGAGGAAGAGAGAGAGACAGGCGACAACTCAAATGACGATGAATCTCCTGAAATTTCTAAATGGGAATCAATAATCTGGCTTTTGGTTATGACTGCTTGGATATCAATTCTTTCCGAATATTTGGTTGGCGCTATAGAGGGAGCATCTAATTCATGGAACATACCAGTAACATTCATTAGTGTCATATTGCTTCCACTGGTGGGGAACGCAGCAGAACATGCTAGTGCTATCATGTTTGCCGGAGATCTATTTCTTGTTCGTGGAGGGATGAGAAGTGTGGAGTTTAAGGTCATTGAAACTGATCCTGGGGAGTACTGTGTGGTTGCTCCAGATACTGAAATCTTCTGTGAGGGGGAGCCTTTGAAAAGAGAGGATGAAGAGAGGCAGGATGAAGTTGGATATGATGATGTAGGTATTCTACTTTATGGACCCCTTGGTTCCGGGAAGACACTGATAGCAAGAGTTGTTGCTAATGAAACGGGAGCTTTCTTCTTTTGTATAAATGGACTGGAGATTATGTCCAAACTGGCAGGAGAGAGTGAAACCAATCTGAGGAAAGCATTTGAAGAGGCTGAAAAGAATGCACCATCCATCATCTTCATTGATGAAATTGATTCTATTGCACCCAAGAGGGAGAAGACACATGGTGAAGTTGAAAGGAGGATTGTTTCACAGCTTTTGACTCTTATGGATGGATTGAAATCTCGTGCTCATGTTATCGTTATTGGAGCTACCAATCGCCCAAACAGCATTGACCCAGCATTGAGAAGGTTCGGTAGATTTGATAGGGAAATTGATATTGGTGTTCCTGATGAAGTTGGTCGACTTGAAGTTCTTCGTATACACACTAAAAACATGAAGCTCTCTGATGATGTAAGTTTCATTGTCTCTTAA 1419 0.4228 MQLGQLQGWVFGLSLLGIIPLVERLGYATEQLAFYTGDTVGGLLNATFRNATELIISLYALKSGLTRVVQLSLLGSILSNMLLVLGCAFLSGGIVFSKKEQVFNKAAATVNSGLLLMAVMGLLFPAVLHYTRTEVHFGKSELALSRFSSCVMLVAYAAYLFFQLRSQSGLYISANEEERETGDNSNDDESPEISKWESIIWLLVMTAWISILSEYLVGAIEGASNSWNIPVTFISVILLPLVGNAAEHASAIMFAGDLFLVRGGMRSVEFKVIETDPGEYCVVAPDTEIFCEGEPLKREDEERQDEVGYDDVGILLYGPLGSGKTLIARVVANETGAFFFCINGLEIMSKLAGESETNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVSFIVS 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01504 472 SMART AAA_5 310 446 IPR003593 -
Adu07g01504 472 CDD AAA 313 443 - -
Adu07g01504 472 Gene3D - 446 463 - -
Adu07g01504 472 Pfam ATPase family associated with various cellular activities (AAA) 314 443 IPR003959 GO:0005524|GO:0016887
Adu07g01504 472 SUPERFAMILY Cdc48 domain 2-like 253 306 IPR029067 -
Adu07g01504 472 Gene3D - 36 177 IPR044880 -
Adu07g01504 472 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 4 255 - -
Adu07g01504 472 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 4 255 IPR004713 GO:0006812|GO:0008324|GO:0016021
Adu07g01504 472 ProSitePatterns AAA-protein family signature. 414 432 IPR003960 GO:0005524|GO:0016887
Adu07g01504 472 Gene3D - 232 309 - -
Adu07g01504 472 Pfam Cell division protein 48 (CDC48), domain 2 254 295 IPR004201 -
Adu07g01504 472 Pfam Sodium/calcium exchanger protein 198 255 IPR004837 GO:0016021|GO:0055085
Adu07g01504 472 Pfam Sodium/calcium exchanger protein 9 164 IPR004837 GO:0016021|GO:0055085
Adu07g01504 472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 312 467 IPR027417 -
Adu07g01504 472 TIGRFAM cax: calcium/proton exchanger 8 255 IPR004798 GO:0006816|GO:0015369
Adu07g01504 472 Gene3D - 313 445 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01504 Adu-Chr7 33276085 33279374 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01504 7 255 Antiporters AT1G55730 76.305 1.12e-132 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01504 K07300 - gmx:100799276 423.32