Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01471 ATGCACATTCTAAGTTATTACTCATCACAACAAGGCAATAATAATAATAATACAATGCAATCCTCATCCTCTATGGAAAACAATGATTTGGAGAACAACAATAGCAATAAGGAAGTTTCAAACAACATCAATGGTAGTGGTAGTGGTATTTTTGCAAAGACACCATCAATGGTGGTGAGAAAGAAGTCATCGTCAGAAGATTCAATTATTGTCACAAACAATAGCAATGGTCGAATGGAAATGCTTAGGAATTTCGTGACAAATTTGAGAGAGGTCATTCTTGGAACTAAGCTTGCTGTGCTTTTTCCGGCAGTGCCTTTGGCTGTTGCTGCAGATTTGTATAGCTTTGGAAGGCCGTGGATTTTTGCATTAAGCTTAATCGGACTTGCCCCGCTAGCAGAACGTGTCAGCTTCCTCACTGAGCAAATTGCCTACTACACTGGTCCAACAGTTGGAGGGCTTCTGAATGCTACATGTGGAAATGCAACGGAGATGATAATTGCATTATTAGCACTGCGCAAGAACAAAGTGGATGTTGTCAAGTTCTCCCTTTTGGGTTCCATTCTCTCCAACCTTCTTTTGGTTCTTGGTAGTTCACTCCTTTGTGGTGGCTTGGCCAACCTTAAGAGGGAGCAAAGATATGACAGGAAACAAGCAGATGTGAACTCACTGCTATTGTTGCTGGGGTTGCTGTGCCATTTGCTGCCATTACTGTTCAAATACGCATTAGCAGGGGGAAGTTATTCAATTGCCACTTCTACCCTTCAGTTGTCAAGAGCAAGCAGTGTTGTCATGCTAATTGCATATCTTGCATATATTGTTTTCCAGTTAAAAACTCATCGAGTAATATTTGATGCACAAGAGGAAGAAGATGATGAAGAAAAGGCCGTTTTAGGATTTTGGAGTTCATTTTCATGGTTGGTTATTATGACATTGGTCATATCTGTGCTATCCGAATATGTTGTGGGAACCATTGAGGCTGCTTCAGATTCTTGGGGCATTTCGGTTAGCTTCATTAGCCTAATCTTGCTTCCAATTGTTGGGAACGCTGCTGAACATGCTGGTGCAATCATATTTGCTTTTAAGAACAAGTTGGACATATCTTTGGGCGTTGCCATGGGATCGGCAACTCAAATTTCCATGTTTGTGGTTCCATTAAGTGTGATTGTTGCATGGATAATGGGCATTCGAATGGATCTGGACTTCAATCTTCTTGACACAGGGTGTCTTGCTTTGGCAATTCTTGTTACGGCATTTACTTTACAGGATGGAACTTCACATTACTTGAAGGGAGTTGTTCTTACCCTATGTTACATTGTAATTGCTGCGTGCTTTTTTGTTCTCAAAACTCCATTTACCGACGACCCTGACATCGAAACTAAAACATCCTATCATGCTGTGGCCTAA 1407 0.4108 MHILSYYSSQQGNNNNNTMQSSSSMENNDLENNNSNKEVSNNINGSGSGIFAKTPSMVVRKKSSSEDSIIVTNNSNGRMEMLRNFVTNLREVILGTKLAVLFPAVPLAVAADLYSFGRPWIFALSLIGLAPLAERVSFLTEQIAYYTGPTVGGLLNATCGNATEMIIALLALRKNKVDVVKFSLLGSILSNLLLVLGSSLLCGGLANLKREQRYDRKQADVNSLLLLLGLLCHLLPLLFKYALAGGSYSIATSTLQLSRASSVVMLIAYLAYIVFQLKTHRVIFDAQEEEDDEEKAVLGFWSSFSWLVIMTLVISVLSEYVVGTIEAASDSWGISVSFISLILLPIVGNAAEHAGAIIFAFKNKLDISLGVAMGSATQISMFVVPLSVIVAWIMGIRMDLDFNLLDTGCLALAILVTAFTLQDGTSHYLKGVVLTLCYIVIAACFFVLKTPFTDDPDIETKTSYHAVA 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01471 468 Pfam Sodium/calcium exchanger protein 303 444 IPR004837 GO:0016021|GO:0055085
Adu07g01471 468 Pfam Sodium/calcium exchanger protein 120 277 IPR004837 GO:0016021|GO:0055085
Adu07g01471 468 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 26 456 IPR004713 GO:0006812|GO:0008324|GO:0016021
Adu07g01471 468 PANTHER VACUOLAR CATION/PROTON EXCHANGER 26 456 - -
Adu07g01471 468 MobiDBLite consensus disorder prediction 1 48 - -
Adu07g01471 468 TIGRFAM caca2: calcium/proton exchanger 84 446 - -
Adu07g01471 468 Gene3D - 149 295 IPR044880 -
Adu07g01471 468 Gene3D - 296 447 IPR044880 -
Adu07g01471 468 TIGRFAM cax: calcium/proton exchanger 103 446 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01471 Adu-Chr7 29822038 29826546 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01471 82 454 Antiporters AT2G38170 69.816 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01471 K07300 - gmx:100802344 603.979