Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01437 ATGGGCGTGGGAGAGACCACAAAACTCGAACCTGAACCCGAACCCGAACCGAAAGATGTTCACCGCCACCAAGAAGAGGAAGAAGAAGACGACGACGACGTGGAAGAAGAAGACGAAGGCTTGTCCGACACAAGAACAGCGATAGCATTGGGTCTGTCAGCGAAGGGGAAAGGGCAGAGGCAGAGGCAGCAGCAGCAGGAGTGCGCGGTGGTCCAGCAGGTGTCGGACAAGCTGGTGAGCGGCAGCCTTCAGTGGAAGATAGAAGCAGCCAGAGAGATCCGTAAGCTCGTCAGGAAATCGCCTTCGTCCTCTAAGACGAGGTCCAGGCTGGGCGCGGCTGGAGTGGTCCAGCCTCTCGTCTTCATGCTGTCGTCATCCAACCCCGATGCCCGTTACTCCTCCCTCCTCGCTCTCCTCAACCTCGCCGTCCGCAACGAACGAAACAAGGTCAAAATAGTGACAGCTGGTGCTATCCCTCCTCTGGTGGAACTCCTCAAAACGCAAAATAGTAGTATAAGGGAATTAGCGACAGCGGCAATCTTGTCACTCTCAGCTGCAGCTCCCAATAAGCCCATAATTGTTGCTTCTGGAGCTGCGCCTCTGCTTGTTAAGATCCTCAACTCTGGAAGTGTTCAAGGCAGAGTTGATGCCGTTACAGCCCTCTATAATCTCTCCACCATCATCAAGAAGAATTCTACTGAACTCCTTAATGCTAGTGCTGTTTCTCCTCTCATCAACCTCCTTAAAGAGTGCAAGAAATACTCCAAGTTTGCCGAGAAAGCTACTGCGCTACTCGAAATTCTCTCCAACTTTGAAGAGGGACGAACCGCAATCTCAGTTGCAGATGGCGGGATTTTAACCTTAGTAGAGACAGTTGAAGATGGATCACTAGTCAGCACACAACATGCTGTTGGAGCTCTGCTGTCATTGTGTCTAAGCTGCCGAGACAAATACCGGGAACTTATCCTCAAAGAAGGAGCAATCCCAGGTTTGTTACGGCTTACAGTGGAGGGCACATCAGAAGCACAAGATAGAGCACGTGTGCTTCTGGATTTGCTTAGAGATTCTCCCCCGGAAAGAAGACTAGCCTCCTCGGTTTTGGAGAAAATTGTTTATGACATCGCTGAACGCGTAGATGGAGCAGACAAAGCTGCTGAAACAGCTAAAAGGTTATTACAAGACATGGTTCAGAGGAGTATGGAACAAAGCTTGAACTGCATTCAGCATAGAGCAGCATCTTGTAATCCTTCTGTGATTCCTTCCACTTGA 1269 0.502 MGVGETTKLEPEPEPEPKDVHRHQEEEEEDDDDVEEEDEGLSDTRTAIALGLSAKGKGQRQRQQQQECAVVQQVSDKLVSGSLQWKIEAAREIRKLVRKSPSSSKTRSRLGAAGVVQPLVFMLSSSNPDARYSSLLALLNLAVRNERNKVKIVTAGAIPPLVELLKTQNSSIRELATAAILSLSAAAPNKPIIVASGAAPLLVKILNSGSVQGRVDAVTALYNLSTIIKKNSTELLNASAVSPLINLLKECKKYSKFAEKATALLEILSNFEEGRTAISVADGGILTLVETVEDGSLVSTQHAVGALLSLCLSCRDKYRELILKEGAIPGLLRLTVEGTSEAQDRARVLLDLLRDSPPERRLASSVLEKIVYDIAERVDGADKAAETAKRLLQDMVQRSMEQSLNCIQHRAASCNPSVIPST 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01437 422 Gene3D - 197 405 IPR011989 -
Adu07g01437 422 SMART arm_5 144 185 IPR000225 GO:0005515
Adu07g01437 422 SMART arm_5 271 312 IPR000225 GO:0005515
Adu07g01437 422 SMART arm_5 186 226 IPR000225 GO:0005515
Adu07g01437 422 SMART arm_5 103 143 IPR000225 GO:0005515
Adu07g01437 422 SMART arm_5 228 270 IPR000225 GO:0005515
Adu07g01437 422 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 239 283 IPR000225 GO:0005515
Adu07g01437 422 MobiDBLite consensus disorder prediction 1 46 - -
Adu07g01437 422 Gene3D - 70 196 IPR011989 -
Adu07g01437 422 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 156 198 IPR000225 GO:0005515
Adu07g01437 422 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 114 156 IPR000225 GO:0005515
Adu07g01437 422 PANTHER U BOX DOMAIN-CONTAINING 58 387 - -
Adu07g01437 422 Pfam Armadillo/beta-catenin-like repeat 145 184 IPR000225 GO:0005515
Adu07g01437 422 Pfam Armadillo/beta-catenin-like repeat 188 225 IPR000225 GO:0005515
Adu07g01437 422 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 58 387 - -
Adu07g01437 422 MobiDBLite consensus disorder prediction 9 25 - -
Adu07g01437 422 MobiDBLite consensus disorder prediction 26 40 - -
Adu07g01437 422 SUPERFAMILY ARM repeat 72 407 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01437 Adu-Chr7 27638698 27641772 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01437 76 360 U-box Gene Family AT3G54790 40.210 2.74e-40 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01437 K08332 - gmx:100782472 528.865