Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01433 ATGGCTCTAACAAATGCTTTTACTCAAAAGGTTGATCGTGTTGCAGACATCAATGCAACGAAACTGGCCTGGAATTTAGTTGTTGGAGTTGTTCGTTTGTACGAAATTCCTAGCTCATGGAATCCCACAGATGTATGCAGCTTAGAATTGGTGCTCCAGGATGAAATGGGTGATCGTATACATTGCTCCATTCCGAAGGCAAATGTGGTGGTCTTTAAGACAGTTGTTCGTGAGTTTGGAATTTACTCAATGAGAAATTTCATTGTTCAGCCAAATTCAAAAGGTGTGAGGACAACTTCACACAAGTTCAAGCTAAGTTTTTATATGAAAACTTCTGTCAGTACTCTCTCCAGTGAGACCTTTCAATTGAATCCTTTCCGATTCGTCTCCTTTACTGAAATTGAAGCAGTTGATGTTGTTAATTTGAATATCCTCCTAGATTGTGTTGGTCACATTGTTGGAAAGGAGGATGTTAGACCAATGGTTACAAAATCAGGTCAAGAAAGTAAATGCATGGCACTATACCTGGAGGATCTTGAGAAAAATAAGATCAAGTGTACTATATTTGGTGAAATGATTGGTAAGTTAACTCCATTTATCAATAAGGATGATGGTGAGCCACTGATCTTGGTCGCTCAACTCTTCAAGCCAAATCAGTACCTCAATCAGATTAATATTCAGAATAGTCTTTATGCCTCGAGAGTGTTCCTGAACCCTGATTTTCCTGATGTTGTTGCATTCAAGAATCGCCTACTGAAAGAAGGTAACATTGGATCCCAACGAATTAATCACATAGAGACCCAACATCAGTATTCTGTGAGTGATGAACTTTCGGGAGGTTCCTTTCCAATCAATACAATTGAAGAAGTTTTGAACATGACTTATGAAGTCTCCACTTGGGTTTTAGCCGCTATAGTGTCTGTTGATGTTGGCACCCGCGATTGGTATTATGCCTCGTGTAAGAATTGTCCTAGAAAAGTTGTGGAGAATAAAGGTCGATATTACTGTGAGCATTGTCGAAAAGTGGGATTTAATGCTCCATTGAGGTATCGACTTAATGTTGTAGTCACTGATGGGACTGGATGCATTAATATAATGCTTTGGAATCAAGAGGCAAAAATCATTCTCGAAAAATCTGCTAATGACATAAGGGATCTAATGAAAAATCTGACCTCTGTGGACCAAGCTTATAATGCTGTTAAGATTAGTGATGATGAGGCACTGATTGATCTCTATTCATCCCACGGTTCTTCCATAGATATTGGAGGGGTTGAACAAGGCCTTTCAAATGTAGTGTCTACAACTGGAAATAATGACCTTGACTTAGATGGGAATGGAGCTGCTATTGTTTCACTATCAAAGGATTCTGGTATTGAGAGCATCTTTGAAAGCGGGTTAGATACTCCTGGTAAATGTGTTATAGCAGATTCTGCTCCAAGCTTGGGTGTTAGTGGACTTACTAATCCGGAAGGCCAGGGATCCAGTAACAAGACTTTCAAACGTGGTTCTACCAAGAGGAAAATTGAGTGA 1530 0.3948 MALTNAFTQKVDRVADINATKLAWNLVVGVVRLYEIPSSWNPTDVCSLELVLQDEMGDRIHCSIPKANVVVFKTVVREFGIYSMRNFIVQPNSKGVRTTSHKFKLSFYMKTSVSTLSSETFQLNPFRFVSFTEIEAVDVVNLNILLDCVGHIVGKEDVRPMVTKSGQESKCMALYLEDLEKNKIKCTIFGEMIGKLTPFINKDDGEPLILVAQLFKPNQYLNQINIQNSLYASRVFLNPDFPDVVAFKNRLLKEGNIGSQRINHIETQHQYSVSDELSGGSFPINTIEEVLNMTYEVSTWVLAAIVSVDVGTRDWYYASCKNCPRKVVENKGRYYCEHCRKVGFNAPLRYRLNVVVTDGTGCINIMLWNQEAKIILEKSANDIRDLMKNLTSVDQAYNAVKISDDEALIDLYSSHGSSIDIGGVEQGLSNVVSTTGNNDLDLDGNGAAIVSLSKDSGIESIFESGLDTPGKCVIADSAPSLGVSGLTNPEGQGSSNKTFKRGSTKRKIE 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01433 509 Gene3D - 271 405 IPR012340 -
Adu07g01433 509 Pfam Domain of unknown function DUF223 49 134 IPR003871 -
Adu07g01433 509 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 25 383 - -
Adu07g01433 509 SUPERFAMILY Nucleic acid-binding proteins 130 252 IPR012340 -
Adu07g01433 509 PANTHER REPLICATION FACTOR A 1, RFA1 25 383 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Adu07g01433 509 CDD RPA1_DBD_A_like 26 113 - -
Adu07g01433 509 SUPERFAMILY Nucleic acid-binding proteins 283 389 IPR012340 -
Adu07g01433 509 SUPERFAMILY Nucleic acid-binding proteins 13 117 IPR012340 -
Adu07g01433 509 Pfam Replication factor-A C terminal domain 312 389 IPR013955 -
Adu07g01433 509 Coils Coil 369 389 - -
Adu07g01433 509 CDD RPA1_DBD_C 301 389 IPR013955 -
Adu07g01433 509 Gene3D - 123 259 IPR012340 -
Adu07g01433 509 Gene3D - 8 115 IPR012340 -
Adu07g01433 509 MobiDBLite consensus disorder prediction 483 509 - -
Adu07g01433 509 MobiDBLite consensus disorder prediction 483 499 - -
Adu07g01433 509 CDD RPA1_DBD_B_like 147 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01433 Adu-Chr7 27539006 27542373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01433 6 386 Core DNA Replication Machinery Family AT5G08020 23.134 1.13e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01433 - - ahf:112718168 813.527