Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01431 ATGGGCCTCTCAAGTCTGCCATCGCCGTCCGAAGGAGTGCTATGTGCACTTCTTGTTAACACTGTGCTCTCAGTCTCCATATTTAAAGGCATTGTTAGGACAATCCTTCACATTGTTGGCATCCACCTTTCATCATCCTCTTCGCCGAACGCCACCTCCCAGAGCCATCAACCATCCGAGTCATTCGAGTTCCTCCTTAGCCCCTCAGAAACATTCATCGAAGAGTTTAGGAGCCGGACGCCTACAATCCGCTTCGACAGCATGTTCTCCTGTGGGAAACCTGAACATGACTGCTGTGTGTGCCTCTCTCAATTTGAGCCGGAATCTGAGATAAACCGCTTGCCCTGCGGCCATCTCTTCCACAAAGTGTGCTTGGAGAAGTGGTTGGATTATTGGAACATCACATGCCCACTTTGCAGGAACCCTTTGATGCCTGAAGACAATGATCCATGGCTCTTAGTAAGCAATGAATGA 474 0.4937 MGLSSLPSPSEGVLCALLVNTVLSVSIFKGIVRTILHIVGIHLSSSSSPNATSQSHQPSESFEFLLSPSETFIEEFRSRTPTIRFDSMFSCGKPEHDCCVCLSQFEPESEINRLPCGHLFHKVCLEKWLDYWNITCPLCRNPLMPEDNDPWLLVSNE 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01431 157 PANTHER E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATED 1 148 - -
Adu07g01431 157 PANTHER - 1 148 IPR044249 -
Adu07g01431 157 Pfam Ring finger domain 97 140 IPR001841 -
Adu07g01431 157 SMART ring_2 98 139 IPR001841 -
Adu07g01431 157 SMART ringv_2 97 140 IPR011016 GO:0008270
Adu07g01431 157 ProSiteProfiles Zinc finger RING-type profile. 98 140 IPR001841 -
Adu07g01431 157 SUPERFAMILY RING/U-box 97 146 - -
Adu07g01431 157 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 145 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01431 Adu-Chr7 27419704 27421676 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01431 1 149 C3H Transcription Factor Family AT2G04240 58.974 1.47e-55 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01431 K16285 - gmx:100786803 247.284