Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01344 ATGCAAACACAAAACAAGTCATCTAACTCACTGAGTCAACTCGCTCAGAGCATGTTCTCATCCAACAACACCATCATGCTTGTCGCCATTGTTTCTCTTCTCCTTGTAATTCTCTTCGTCCTTCTCCTCCATCTCTACGCCAAATGCTTCCTCTCTCACTCTCACCCACCACCTCAACAACCTCCCCGCCGTCGCCGTCGCCGCCGCCATCGCCACCGTGCAACTCTCCCTGCCTTCCAGGGTCCACCCCAGTTCCAGTTCCACCACTTGCTCGTGGAGGACTCACCCTTTGCCACCAAAGGACTCGATTCCGCTACGGTTTCAGCGATTCCCGTGTTTGTGTACGAAGCAGAGAAGAAGAGGAAAACAGAGCAAGAAGAAGACAGAGAGGAATTAGAATGTGTGATTTGTTTGAGCGGTTTCGAAGAAGGTGAAATGGGAAGAACATTACCAAAATGTGGACACGCTTTTCACGTGGAATGCATTGATATGTGGCTGAGTTCTCATTGTAACTGTCCCATTTGTAGAGCTCCTGTTGTTCATCAGAATGATACGGGTTCTGTTGATGATGAAGATGATGATGGTGTGGTTCAGATTGTTATTGGTACTCCGAGTTATGAGATTAGTGAGAGTGAGAATGGGAACAATGATGAGGATAATAATTCAGTTTCAGTTTCAGGTTCAGAAACTTCATATTCTTCTTCTTCGTCCTCTTTGTTGTTGGGGTGTTCTTTCAAGAGAATGCTGAGAAAGGTTTTTGTCTCGTGA 768 0.4622 MQTQNKSSNSLSQLAQSMFSSNNTIMLVAIVSLLLVILFVLLLHLYAKCFLSHSHPPPQQPPRRRRRRRHRHRATLPAFQGPPQFQFHHLLVEDSPFATKGLDSATVSAIPVFVYEAEKKRKTEQEEDREELECVICLSGFEEGEMGRTLPKCGHAFHVECIDMWLSSHCNCPICRAPVVHQNDTGSVDDEDDDGVVQIVIGTPSYEISESENGNNDEDNNSVSVSGSETSYSSSSSSLLLGCSFKRMLRKVFVS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01344 255 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 4 254 IPR044675 -
Adu07g01344 255 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 181 IPR013083 -
Adu07g01344 255 SMART ring_2 134 175 IPR001841 -
Adu07g01344 255 PANTHER - 4 254 - -
Adu07g01344 255 CDD RING-H2_EL5_like 134 176 - -
Adu07g01344 255 MobiDBLite consensus disorder prediction 207 237 - -
Adu07g01344 255 SUPERFAMILY RING/U-box 113 182 - -
Adu07g01344 255 ProSiteProfiles Zinc finger RING-type profile. 134 176 IPR001841 -
Adu07g01344 255 Coils Coil 115 135 - -
Adu07g01344 255 Pfam Ring finger domain 133 176 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01344 Adu-Chr7 22884968 22885853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01344 19 224 Rapid Response to Elicitors AT3G16720 35.749 4.58e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01344 - - aprc:113874423 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g01344 07 22884968 22885853 Adu07g01344 07 22884968 22885853 ECH
Adu01g00435 01 5945059 5946245 Adu07g01344 07 22884968 22885853 PCT