Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu07g01259 | ATGATATTTTTTTTAATAATTAATTCTTGTTTTGATGAGCAGATTTTGCCATCTCCAACAACGGGGGCATTTGTTGCACATAACTACAATAATTGGAAGAACAACAACAATTCTGGTGGGAACCAACAACAAGTTATCATCAAAGAGGAAGAAGGAAAGAACAACAATTTCTCAAACTTCTCTTTCCAAACCCAGCCATCTATGTTTCAATCCTCATCAACTGCCACAACTCAAACAGTATGTAACCAATTTCAACAGCAGCAGCCGCCATGGGGATTTCAAGAATCCAACAAGAAACAGGAAAATTTCTCATCATCAAAAACTGTGATGAAAACTGAGAACACTTGTTCCAACCAAAACAACAATGGGTTCCAATCAGATTACAGCAGCAACAACAATTACCAGCCACAATCTCAGACTCTAAGCAGAAGATCAGATGATGGTTACAATTGGAGAAAATATGGTCAGAAACAAGTGAAAGGTAGTGAGAATCCAAGAAGTTACTATAAATGCACATTCCCAAATTGCCCAACAAAGAAGAAAGTTGAGAGATCCTTGGATGGACAAATCACAGAGATTGTTTATAAGGGTACTCATAATCACCCTAAGCCTCAGAACACTAGGAGAAACTCTTCATCTTCTTCTAATTCTGCTGCTTTTGCAATTGCTCCCTCCAATCAAATGAACAACTCTGAGGTGACTGATCATCAATCTTATACACATGGTAGTGGGCAAATGGATTCTGTTGCCACCCCTGAGAACTCCTCAATTTCAGTTGGGGATGATGATTTTGAACAAAGCTCTCAGAGGTGTAAATCAGTTGGAGATGAATATGATGATGATGAACCTGATGCCAAAAGATGGAAAATTGAAGGGGAAAATGAGGGAATATCAGGAGGTGGAAGTAGAACAGTGAGAGAACCAAGGGTTGTGGTTCAGACAACAAGTGACATAGATATCCTTGATGATGGCTACAGATGGAGGAAGTATGGCCAGAAAGTAGTGAAGGGCAATCCAAATCCAAGGAGCTACTACAAGTGCACACACCCAGGTTGTCCAGTGAGGAAGCATGTAGAGAGAGCCTCACATGACCTGAGGGCAGTGATAACAACCTATGAAGGCAAACACAACCATGATGTCCCCGCCGCCCGCGGCAGCGGAAGCCATGCCTCTGTCAACAGACCAATGCCCAACAACCACCACAACAATGCAAGCATTGCAATTAGGCCTTTACCATCAATGACACACCACAACAACAACAACACTAACAACGTTACTTCCCTTCAACAAGGGCCAGAAGGACAATCACCCTTCACACTTGAAATGCTTCAGAACCCTTCAAGCTATGGATTCTCATCTTCTGGGTTTGGGAATCCAATGGGTTCTTACATGCCTCAGCAGCAGCAACAACAGCAATCTGACAATGTGTTTTCTTCCAGAGCCAAGGAGGAACCTAGGGATGACATGTTCCTTGAATCTTTGCTATGCTGA | 1491 | 0.4219 | MIFFLIINSCFDEQILPSPTTGAFVAHNYNNWKNNNNSGGNQQQVIIKEEEGKNNNFSNFSFQTQPSMFQSSSTATTQTVCNQFQQQQPPWGFQESNKKQENFSSSKTVMKTENTCSNQNNNGFQSDYSSNNNYQPQSQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLDGQITEIVYKGTHNHPKPQNTRRNSSSSSNSAAFAIAPSNQMNNSEVTDHQSYTHGSGQMDSVATPENSSISVGDDDFEQSSQRCKSVGDEYDDDEPDAKRWKIEGENEGISGGGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHASVNRPMPNNHHNNASIAIRPLPSMTHHNNNNTNNVTSLQQGPEGQSPFTLEMLQNPSSYGFSSSGFGNPMGSYMPQQQQQQQSDNVFSSRAKEEPRDDMFLESLLC | 496 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu07g01259 | 496 | MobiDBLite | consensus disorder prediction | 89 | 108 | - | - | |
Adu07g01259 | 496 | SUPERFAMILY | WRKY DNA-binding domain | 144 | 204 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Adu07g01259 | 496 | Gene3D | WRKY domain | 129 | 205 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Adu07g01259 | 496 | SMART | WRKY_cls | 145 | 203 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Adu07g01259 | 496 | SMART | WRKY_cls | 321 | 380 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Adu07g01259 | 496 | PANTHER | WRKY TRANSCRIPTION FACTOR WRKY24-LIKE | 13 | 470 | - | - | |
Adu07g01259 | 496 | MobiDBLite | consensus disorder prediction | 200 | 264 | - | - | |
Adu07g01259 | 496 | MobiDBLite | consensus disorder prediction | 265 | 285 | - | - | |
Adu07g01259 | 496 | SUPERFAMILY | WRKY DNA-binding domain | 313 | 381 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Adu07g01259 | 496 | MobiDBLite | consensus disorder prediction | 113 | 145 | - | - | |
Adu07g01259 | 496 | MobiDBLite | consensus disorder prediction | 113 | 150 | - | - | |
Adu07g01259 | 496 | MobiDBLite | consensus disorder prediction | 391 | 478 | - | - | |
Adu07g01259 | 496 | MobiDBLite | consensus disorder prediction | 195 | 285 | - | - | |
Adu07g01259 | 496 | ProSiteProfiles | WRKY domain profile. | 146 | 204 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Adu07g01259 | 496 | Gene3D | WRKY domain | 308 | 374 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Adu07g01259 | 496 | ProSiteProfiles | WRKY domain profile. | 316 | 381 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Adu07g01259 | 496 | MobiDBLite | consensus disorder prediction | 376 | 496 | - | - | |
Adu07g01259 | 496 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 13 | 470 | IPR044810 | GO:0003700 | |
Adu07g01259 | 496 | Pfam | WRKY DNA -binding domain | 322 | 378 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Adu07g01259 | 496 | Pfam | WRKY DNA -binding domain | 146 | 202 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu07g01259 | Adu-Chr7 | 20480210 | 20482912 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu07g01259 | 125 | 495 | WRKY Transcription Factor Family | AT2G38470 | 56.555 | 5.34e-116 | 350 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Adu07g01259 | WRKY | 1.3e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu07g01259 | K13424 | - | gmx:100127393 | 649.818 |