Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01259 ATGATATTTTTTTTAATAATTAATTCTTGTTTTGATGAGCAGATTTTGCCATCTCCAACAACGGGGGCATTTGTTGCACATAACTACAATAATTGGAAGAACAACAACAATTCTGGTGGGAACCAACAACAAGTTATCATCAAAGAGGAAGAAGGAAAGAACAACAATTTCTCAAACTTCTCTTTCCAAACCCAGCCATCTATGTTTCAATCCTCATCAACTGCCACAACTCAAACAGTATGTAACCAATTTCAACAGCAGCAGCCGCCATGGGGATTTCAAGAATCCAACAAGAAACAGGAAAATTTCTCATCATCAAAAACTGTGATGAAAACTGAGAACACTTGTTCCAACCAAAACAACAATGGGTTCCAATCAGATTACAGCAGCAACAACAATTACCAGCCACAATCTCAGACTCTAAGCAGAAGATCAGATGATGGTTACAATTGGAGAAAATATGGTCAGAAACAAGTGAAAGGTAGTGAGAATCCAAGAAGTTACTATAAATGCACATTCCCAAATTGCCCAACAAAGAAGAAAGTTGAGAGATCCTTGGATGGACAAATCACAGAGATTGTTTATAAGGGTACTCATAATCACCCTAAGCCTCAGAACACTAGGAGAAACTCTTCATCTTCTTCTAATTCTGCTGCTTTTGCAATTGCTCCCTCCAATCAAATGAACAACTCTGAGGTGACTGATCATCAATCTTATACACATGGTAGTGGGCAAATGGATTCTGTTGCCACCCCTGAGAACTCCTCAATTTCAGTTGGGGATGATGATTTTGAACAAAGCTCTCAGAGGTGTAAATCAGTTGGAGATGAATATGATGATGATGAACCTGATGCCAAAAGATGGAAAATTGAAGGGGAAAATGAGGGAATATCAGGAGGTGGAAGTAGAACAGTGAGAGAACCAAGGGTTGTGGTTCAGACAACAAGTGACATAGATATCCTTGATGATGGCTACAGATGGAGGAAGTATGGCCAGAAAGTAGTGAAGGGCAATCCAAATCCAAGGAGCTACTACAAGTGCACACACCCAGGTTGTCCAGTGAGGAAGCATGTAGAGAGAGCCTCACATGACCTGAGGGCAGTGATAACAACCTATGAAGGCAAACACAACCATGATGTCCCCGCCGCCCGCGGCAGCGGAAGCCATGCCTCTGTCAACAGACCAATGCCCAACAACCACCACAACAATGCAAGCATTGCAATTAGGCCTTTACCATCAATGACACACCACAACAACAACAACACTAACAACGTTACTTCCCTTCAACAAGGGCCAGAAGGACAATCACCCTTCACACTTGAAATGCTTCAGAACCCTTCAAGCTATGGATTCTCATCTTCTGGGTTTGGGAATCCAATGGGTTCTTACATGCCTCAGCAGCAGCAACAACAGCAATCTGACAATGTGTTTTCTTCCAGAGCCAAGGAGGAACCTAGGGATGACATGTTCCTTGAATCTTTGCTATGCTGA 1491 0.4219 MIFFLIINSCFDEQILPSPTTGAFVAHNYNNWKNNNNSGGNQQQVIIKEEEGKNNNFSNFSFQTQPSMFQSSSTATTQTVCNQFQQQQPPWGFQESNKKQENFSSSKTVMKTENTCSNQNNNGFQSDYSSNNNYQPQSQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLDGQITEIVYKGTHNHPKPQNTRRNSSSSSNSAAFAIAPSNQMNNSEVTDHQSYTHGSGQMDSVATPENSSISVGDDDFEQSSQRCKSVGDEYDDDEPDAKRWKIEGENEGISGGGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHASVNRPMPNNHHNNASIAIRPLPSMTHHNNNNTNNVTSLQQGPEGQSPFTLEMLQNPSSYGFSSSGFGNPMGSYMPQQQQQQQSDNVFSSRAKEEPRDDMFLESLLC 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01259 496 MobiDBLite consensus disorder prediction 89 108 - -
Adu07g01259 496 SUPERFAMILY WRKY DNA-binding domain 144 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu07g01259 496 Gene3D WRKY domain 129 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu07g01259 496 SMART WRKY_cls 145 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu07g01259 496 SMART WRKY_cls 321 380 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu07g01259 496 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 13 470 - -
Adu07g01259 496 MobiDBLite consensus disorder prediction 200 264 - -
Adu07g01259 496 MobiDBLite consensus disorder prediction 265 285 - -
Adu07g01259 496 SUPERFAMILY WRKY DNA-binding domain 313 381 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu07g01259 496 MobiDBLite consensus disorder prediction 113 145 - -
Adu07g01259 496 MobiDBLite consensus disorder prediction 113 150 - -
Adu07g01259 496 MobiDBLite consensus disorder prediction 391 478 - -
Adu07g01259 496 MobiDBLite consensus disorder prediction 195 285 - -
Adu07g01259 496 ProSiteProfiles WRKY domain profile. 146 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu07g01259 496 Gene3D WRKY domain 308 374 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu07g01259 496 ProSiteProfiles WRKY domain profile. 316 381 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu07g01259 496 MobiDBLite consensus disorder prediction 376 496 - -
Adu07g01259 496 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 13 470 IPR044810 GO:0003700
Adu07g01259 496 Pfam WRKY DNA -binding domain 322 378 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu07g01259 496 Pfam WRKY DNA -binding domain 146 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01259 Adu-Chr7 20480210 20482912 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01259 125 495 WRKY Transcription Factor Family AT2G38470 56.555 5.34e-116 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu07g01259 WRKY 1.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01259 K13424 - gmx:100127393 649.818