Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01223 ATGGAATTCCAAAGTAGAGAGCAGGCTGATAATGCCAAACTTGTTAAAGCTCAAAGTCACATATGGAATCATATTTTTAATTTTATAAACTCCATGTCTCTTAAATGTGCTGTTGAGTTAGGCATACCTGATGCCATTCACAACTATGGCAAACCTATGCCACTTTCACAACTTGTTGCTTCATTGCAAATTCATCCATCAAAAACCTCCTTCGTCCAGCGATTGATGAGAATCTTGGTCCATTCCAACTTCTTCACTGCCAAGGATGTCACCAGCAATGAAGTTGGGTATGTTCTAACTGATTCGTCTATGTTGTTGCTTAAGGACAACCCCTTAAATTTAATACCTTACTTGTTTATCATGCTTGATCCCTTTGTTCTAAAACCATGGCATCAGATGTCCACATGGTTTAAAAATGATGATCCTACATCATTTGAAACGGAATATGGGATAACGGTGTGGGATCATGCTAGCCAAGTTCCTCAATTCAATGAAATTTTGAACGATGCCATGGCAAGTGATGCTCGATTGATTAGCAAGTTGTTAGTTGATGACAAGTGCAAGGGAGTGTTTGAGGGTTTGGAATCATTGGTTGATGTTGGTGGAGGCACCGGAACTGTTGCAAAGGCCATTGTCAAAGCATTCCCACAGTTAGAGTGCACTGTTCTTGATCTTCCACACGTTGTTGCTGATTTGGAAGGAAGTCAGAACCTTAAATACGTTGGAGGAGACATGTTTGAGGCCATTCCTCCTTCTAATGCCATTTTGTTGAAGTGGATTTTGCATAACTGGAATGATGAGGAATGTTTGAAAATATTGAAAAACTGCAAAGAGGCACTACGCATGAGTAAAGGGGAAGGAAGCAAGGTTATTGTTATAGACATGGTGGTGGGGGATGAGAATACTGATCATGAATTGGCTGAAACACAACTCTTCTTTGACATGTTGATGATGGTGTTCCTCACAGGAAAGCAGAGAAATAAAGAAGAATGGGCCAACTTAATATTCTCAGCTGGTTTCAGCAATTACAAAATAATTCCAATTCTAGGATTAAGTTCATCCTACTTCCTCCTCACTCCCACTAGCAACAACAGCTCCGGCCTAGCAACGTTCTCCAGCGCTGTCACCGGCGTTGACACAAACGGTGACGCTTACCTCGCCTGCGTCCCTCTGGCTTGTTGCTACTACTACATCTCTATCGTTGAGTTGCCGCCCAAAAATCGCCTGTGGCCTCGCCTCTCTGGTATCCGTCGAATGACATCTTTGCTTGCTTCTTCGGCGTCAACGACAGTAAGCTCCTTGTCCTCTCCTGTGCCTTCTGTTCATCCCTAA 1332 0.4272 MEFQSREQADNAKLVKAQSHIWNHIFNFINSMSLKCAVELGIPDAIHNYGKPMPLSQLVASLQIHPSKTSFVQRLMRILVHSNFFTAKDVTSNEVGYVLTDSSMLLLKDNPLNLIPYLFIMLDPFVLKPWHQMSTWFKNDDPTSFETEYGITVWDHASQVPQFNEILNDAMASDARLISKLLVDDKCKGVFEGLESLVDVGGGTGTVAKAIVKAFPQLECTVLDLPHVVADLEGSQNLKYVGGDMFEAIPPSNAILLKWILHNWNDEECLKILKNCKEALRMSKGEGSKVIVIDMVVGDENTDHELAETQLFFDMLMMVFLTGKQRNKEEWANLIFSAGFSNYKIIPILGLSSSYFLLTPTSNNSSGLATFSSAVTGVDTNGDAYLACVPLACCYYYISIVELPPKNRLWPRLSGIRRMTSLLASSASTTVSSLSSPVPSVHP 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01223 443 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 360 IPR016461 GO:0008168
Adu07g01223 443 Pfam Dimerisation domain 32 80 IPR012967 GO:0046983
Adu07g01223 443 PANTHER O-METHYLTRANSFERASE 12 352 - -
Adu07g01223 443 Pfam O-methyltransferase domain 130 341 IPR001077 GO:0008171
Adu07g01223 443 PANTHER O-METHYLTRANSFERASE 12 352 IPR016461 GO:0008168
Adu07g01223 443 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 350 IPR029063 -
Adu07g01223 443 Gene3D Vaccinia Virus protein VP39 107 355 IPR029063 -
Adu07g01223 443 SUPERFAMILY "Winged helix" DNA-binding domain 13 111 IPR036390 -
Adu07g01223 443 Gene3D - 3 106 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01223 Adu-Chr7 19010486 19015190 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01223 32 346 Monolignol Biosynthesis Gene Families AT5G54160 31.889 6.38e-46 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01223 - K16040 aip:107609507 508.064