Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01189 ATGTTCTTCACCAACAATCCGAGggtctgtcggcgtcgccttcgaagGACAAACTCTAGCGATGGCTCAAGGCAGGAGAAATATGGAATGACTAACAAACTCCAAGGAGAGCCTAAGGATGCGCTGACCTCGCTTCCCTTCTTCTCCGCGGCGGCCTACTCTCTTTTCTGCTTAACAGCTGCCTCCTCTTCTCCCCTCTGCCGCCTCCTCTCCACCGTTGAAGTTGAAGCTGAAGCATGGAGGATTTTTGTCAAAGGTTTAGCATTTTCTACCACAAAAGAGAAATTAGCTGAAGCCTTTTCAGAATATGGCAATGTCCTAAATGCTGATATAGTACTGAACAAAGCCAAGAACAGATCTAAGGGTTTTGGATACGTGACCTTTGCTAAGGAGGAAGAAGCCCGCAAGGCACAGATGGCCATGAATGGAAAGATATTGCATGGACGTGTTCTGTACGTGGATATGGAACCAAATAAGAAACCAGAAAAATCATCTTTTGACAAGGCAACTACTGATGGTTGA 522 0.433 MFFTNNPRVCRRRLRRTNSSDGSRQEKYGMTNKLQGEPKDALTSLPFFSAAAYSLFCLTAASSSPLCRLLSTVEVEAEAWRIFVKGLAFSTTKEKLAEAFSEYGNVLNADIVLNKAKNRSKGFGYVTFAKEEEARKAQMAMNGKILHGRVLYVDMEPNKKPEKSSFDKATTDG 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01189 173 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 80 158 IPR000504 GO:0003723
Adu07g01189 173 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 82 151 IPR000504 GO:0003723
Adu07g01189 173 PANTHER TRANSFORMER-2-RELATED 70 158 - -
Adu07g01189 173 SUPERFAMILY RNA-binding domain, RBD 77 161 IPR035979 GO:0003676
Adu07g01189 173 MobiDBLite consensus disorder prediction 14 33 - -
Adu07g01189 173 SMART rrm1_1 81 154 IPR000504 GO:0003723
Adu07g01189 173 Gene3D - 7 168 IPR012677 -
Adu07g01189 173 PANTHER RNA RECOGNITION MOTIF 70 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01189 Adu-Chr7 18068852 18074010 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01189 76 153 Eukaryotic Initiation Factors Gene Family AT1G22760 39.744 5.18e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01189 - K13195 gmx:100527061 126.716