Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01172 ATGCAAGATCCACCACCAACACCACCACCTCCAAACTCCGCTTCCCACTTACCTCCACCGGCCCCCTCCACCGCCGCAACTTCCTCAGCCTCCTCACTCTTCGTTCGCTCCGCCGCCAATGGCCACCGCCGAGCTCACTCCGAAGTCAGTTTCCGCTTACCTGACGACATGATGGACCTCTCGCCGTCGGATCCGTTCACCGGCGGCTCCTCCACGGCCAGCCTCGACGAGATCGGATCGGAGGATGACCTGTTCACGACGTACATTGACGTGGACAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGATTGGGAACGGTACAGAATCGGAGAAGGCGGTTCCGAGGCCGAGGCACAGGCACAGTAACTCTGTGGATGGTTCTACGACGTCGTTTGGGGAGATCATGGACGCTAAGAAAGCTATGCCTCCTGATAAGCTCGCTGAGCTTTGGACCATTGATCCCAAGCGTGCTAAGAGGATACTTGCAAATAGGCAATCTGCTGCTCGATCAAAAGAGAGAAAGGCTCGCTACATTCAAGAACTTGAGCGCAAAGTTCAGACTCTTCAAACTGAAGCCACAACCCTTTCTGCCCAGCTGACACTATACCAGAGGGACACAAATGGTCTGAGTACTGAAAACACAGAGCTTAAGCTCCGCCTGCAAGCCATGGAGCAACAAGCACAACTTCGTGATGCTTTAAATGAGGCACTGAAGAAAGAAGTCGAGAGGCTTAAGGTTGCCACTGGCGAAATGATGAGCCCCACCGAGTCTTTTAACCTTGGAATGCACCAGATGCCATTCACAGGAGCAAATTTCTTTCCGATCCCACCCCAATCAGGTCCTTCTGATCACCAGAACATGCAGTTGCCACCATTTGCTCACGCCCCATCTGGCATGCCAACGCATCAACTACAACAATCGAGTTCTCATCCACTCTCGGAAATAATGCAAAATCATATGCAGGGACTCGACATCAACAGCAAAGGACCAACTACGGTGAAGTCCGAAGGCCCATCAATTTCTGCAAGTGAGAGTAGCACTACATTCTGA 1080 0.4981 MQDPPPTPPPPNSASHLPPPAPSTAATSSASSLFVRSAANGHRRAHSEVSFRLPDDMMDLSPSDPFTGGSSTASLDEIGSEDDLFTTYIDVDKXXXXXXXXXXXXXXXXXXXIGNGTESEKAVPRPRHRHSNSVDGSTTSFGEIMDAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTNGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKVATGEMMSPTESFNLGMHQMPFTGANFFPIPPQSGPSDHQNMQLPPFAHAPSGMPTHQLQQSSSHPLSEIMQNHMQGLDINSKGPTTVKSEGPSISASESSTTF 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01172 359 Coils Coil 181 208 - -
Adu07g01172 359 PANTHER ATBZIP TRANSCRIPTION FACTOR 15 356 - -
Adu07g01172 359 Gene3D - 164 217 - -
Adu07g01172 359 SUPERFAMILY Leucine zipper domain 165 216 IPR046347 GO:0003700|GO:0006355
Adu07g01172 359 Coils Coil 91 93 - -
Adu07g01172 359 MobiDBLite consensus disorder prediction 333 359 - -
Adu07g01172 359 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 15 356 - -
Adu07g01172 359 MobiDBLite consensus disorder prediction 107 140 - -
Adu07g01172 359 MobiDBLite consensus disorder prediction 279 315 - -
Adu07g01172 359 MobiDBLite consensus disorder prediction 1 18 - -
Adu07g01172 359 MobiDBLite consensus disorder prediction 1 78 - -
Adu07g01172 359 Pfam bZIP transcription factor 165 222 IPR004827 GO:0003700|GO:0006355
Adu07g01172 359 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 163 226 IPR004827 GO:0003700|GO:0006355
Adu07g01172 359 Coils Coil 216 260 - -
Adu07g01172 359 CDD bZIP_plant_RF2 166 215 IPR044759 GO:0003700|GO:0006355
Adu07g01172 359 SMART brlzneu 161 225 IPR004827 GO:0003700|GO:0006355
Adu07g01172 359 MobiDBLite consensus disorder prediction 19 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01172 Adu-Chr7 17477391 17480805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01172 1 359 bZIP Transcription Factor Family AT2G40620 51.010 4.36e-97 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Adu07g01172 bZIP_1 6.3e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01172 - - gmx:778172 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g01172 07 17477391 17480805 Adu07g01172 07 17477391 17480805 ECH
Adu01g00538 01 7382022 7385170 Adu07g01172 07 17477391 17480805 PCT