Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01167 ATGGTGGCTTCGGCACTGTCTTCTCCAGCACGTCCAAAGTCCACTGCCCACACTCCGCCAAAAATTGCAACGACTCATCAGACGAGATTTGACCGTTTGATGGCTTCGTTGTCTCCATCAATGGAAAGAAGCGTGGTCAGGGATGAAGATATCCTTGCAAGTGTGCATCTTGCCGACGAAGTAAAACTGTACGATGGAGCAGACCATAGAGTTGGATCAGTTGAGGGCAAAGGCTTTGCAGGGATGGAATCAGACGAGTATGAGTTACACGAAGATGAAACAAAACACGACCATCTTGGAGAGGCCGATGGCAACAATGGGATGTGTTCAATTGATTTTGCGAACTTGAGCAAGAAGGAAGTTTGCTGGTTTAATTTCACAGATGTCAACATTACATTTGAGTTCTACCAAGCATATGCAAAGCACCATGGTTTTGGCGGGAGACGTTCCAAGAGTGAAAAATATCGCCAAGTAAGGATACGGCAGGAATTCGTGTGCCACCGACAAGGGTTTAGATCGGTGAAGTTCTACTTAATTCTAAACCGGCAAAAGAGGCCAAGGGCCGAGACACAGTGTGGATGCCCTGCAAGGATGCATGTTAGCATGGACGATGAATCAGAGCATTGGTACGTTGCGCACGTTTCAAACGAGCATAACCACCCGGTTCTTGAATTGAAATTTTCTTCCATGCTCCCAAGCCATCGGAGAATGAACGAAGCAGACATTGAGCAGATGAACGACATGCACAAAGGGGACATTGCCGTATTACGAATCCACAATTTTATGGCGAGTCTAGCCGGCGGATATTATAATGTCCCCTACACAACAAGTAACATGTACAATGAAGTGGAGGCTGATTTTGAGTGTGCAAAGGGTGACCCTGTTATGACCACTAACCTAAAACAGTTGGAGCGTTGTGTAGCTGAGAACAACACTCGGGCAATATTCTATTTGTTTGTTCCCATTCTTGATAGGACATGTGCAATGAGGGTGGTTGATTCTAAAGACAGTAGTTCATATTTTATCCACACCGTCTCTCGATACGGCACTTCAGGGAAAGATTGGTGTGTTGTTACAAGATATGAAATGAGTGAGGTTCGATGCACGTGCAAGAGAATGGAATGTTTCGGGGTCCCTTGCAAACATATAATTGTAGTGCTTGTTCTTAACAATGTTCATGAGATCCCAAAGAAAGTGTGCAAAATTGGTTGTTGCAGCACTGTAAAGTTCCAGTTTGCAAGAGACATTGTCATGTTGATGTTGAAGCACTTCAAGAATGAAGATGCAGCCGACAACAGTTTTTCACCTGAGGGGCCATCCAATGAAGGTAGCAGAGCATTAGCATAG 1347 0.4491 MVASALSSPARPKSTAHTPPKIATTHQTRFDRLMASLSPSMERSVVRDEDILASVHLADEVKLYDGADHRVGSVEGKGFAGMESDEYELHEDETKHDHLGEADGNNGMCSIDFANLSKKEVCWFNFTDVNITFEFYQAYAKHHGFGGRRSKSEKYRQVRIRQEFVCHRQGFRSVKFYLILNRQKRPRAETQCGCPARMHVSMDDESEHWYVAHVSNEHNHPVLELKFSSMLPSHRRMNEADIEQMNDMHKGDIAVLRIHNFMASLAGGYYNVPYTTSNMYNEVEADFECAKGDPVMTTNLKQLERCVAENNTRAIFYLFVPILDRTCAMRVVDSKDSSSYFIHTVSRYGTSGKDWCVVTRYEMSEVRCTCKRMECFGVPCKHIIVVLVLNNVHEIPKKVCKIGCCSTVKFQFARDIVMLMLKHFKNEDAADNSFSPEGPSNEGSRALA 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01167 448 Pfam FAR1 DNA-binding domain 134 223 IPR004330 -
Adu07g01167 448 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 108 253 - -
Adu07g01167 448 Pfam SWIM zinc finger 364 387 IPR007527 GO:0008270
Adu07g01167 448 MobiDBLite consensus disorder prediction 1 23 - -
Adu07g01167 448 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 108 253 - -
Adu07g01167 448 ProSiteProfiles Zinc finger SWIM-type profile. 357 391 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01167 Adu-Chr7 17260897 17263495 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu07g01167 FAR1 3.2e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01167 - - adu:110277243 370.163