Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01145 ATGTCCGTACAGTCAACACTGAAGCTGGAGAAGTTGAACTTGAAGCTCTCGCCTTCAAGCTCAAATTTTGAGGGTGACCCACCAAGTAAGACTAGGCGCAAAACGAAACAGAGGTTGGTTCGGATCATCCTCACTGACCACGACGCTACCGATTCCGATTCTTCAAGCGACGAAGCACAACGAAACAACACACACAAACTCAAAAGAGAGATCACGCAAATAACCATGCACCTTCCCTCACCATATTCCTCTACTACTACTTCCCCTTCTCCTTCTTCTTCTTCTTCTTCAACTTCATCTTCTATCTTTGGTTCCGTCTCTTCTGATTCATTGCAACGGAGAACCAAATCATGCAAGAGACCCAAGAAACCGCAACTTCAACCGCCGGAGCGCCATCGCAACAGGTTCCGCGGTGTGAGACAGCGGCCGTGGGGACGGTGGGCTGCCGAGATCCGTGACCCGACCCAACGAAAACGGGTCTGGCTTGGAACCTTTGACACGGCGGAGGAGGCCGCCACCGAGTACGACCGTGCGGCGGTGAAGCTCAAGGGTCCAAACGCCGTTACGAACTTTCCGGTTAACTCTTCGGCGGGTATTACGGCGGTTGATAACGGTGTAGCGGCGTTTTCCGATGCGGTCGCGCTTTCTCCAACTTCTGTTTTGCCTTACGACGGTGACTCGACGCCGTTTGACGGTTTCCGTTACGTGGACGCTTTTGGCTTCGACATCGCCGATGAGGCGCCGTTAAGTTTGACGGACGTCGACGTTAGCAGCGTTATGCTGACGTGTCAGCGTCTTGATGCAAAAGAGGATGAAGCGTTCGGCGAGTTTGACCTCGACGAGTTCATTACGTGGCCGTACTAA 864 0.5289 MSVQSTLKLEKLNLKLSPSSSNFEGDPPSKTRRKTKQRLVRIILTDHDATDSDSSSDEAQRNNTHKLKREITQITMHLPSPYSSTTTSPSPSSSSSSTSSSIFGSVSSDSLQRRTKSCKRPKKPQLQPPERHRNRFRGVRQRPWGRWAAEIRDPTQRKRVWLGTFDTAEEAATEYDRAAVKLKGPNAVTNFPVNSSAGITAVDNGVAAFSDAVALSPTSVLPYDGDSTPFDGFRYVDAFGFDIADEAPLSLTDVDVSSVMLTCQRLDAKEDEAFGEFDLDEFITWPY 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01145 287 PIRSF PTI6 9 287 IPR017392 GO:0003700
Adu07g01145 287 MobiDBLite consensus disorder prediction 27 72 - -
Adu07g01145 287 ProSiteProfiles AP2/ERF domain profile. 135 192 IPR001471 GO:0003700|GO:0006355
Adu07g01145 287 PANTHER PATHOGENESIS-RELATED GENES TRANSCRIPTIONAL ACTIVATOR PTI6-LIKE 33 283 - -
Adu07g01145 287 CDD AP2 135 194 IPR001471 GO:0003700|GO:0006355
Adu07g01145 287 MobiDBLite consensus disorder prediction 76 112 - -
Adu07g01145 287 SUPERFAMILY DNA-binding domain 135 194 IPR016177 GO:0003677
Adu07g01145 287 Pfam AP2 domain 135 184 IPR001471 GO:0003700|GO:0006355
Adu07g01145 287 PRINTS Ethylene responsive element binding protein signature 136 147 IPR001471 GO:0003700|GO:0006355
Adu07g01145 287 PRINTS Ethylene responsive element binding protein signature 158 174 IPR001471 GO:0003700|GO:0006355
Adu07g01145 287 MobiDBLite consensus disorder prediction 1 26 - -
Adu07g01145 287 SMART rav1_2 135 198 IPR001471 GO:0003700|GO:0006355
Adu07g01145 287 Gene3D AP2/ERF domain 134 194 IPR036955 GO:0003700|GO:0006355
Adu07g01145 287 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 33 283 - -
Adu07g01145 287 MobiDBLite consensus disorder prediction 1 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01145 Adu-Chr7 16817784 16819497 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01145 30 223 AP2-EREBP Transcription Factor Family AT4G27950 40.976 5.67e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Adu07g01145 AP2 1.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01145 K13434 - gmx:100817278 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g01145 07 16817784 16819497 Adu07g01145 07 16817784 16819497 ECH
Adu01g00560 01 7713913 7715565 Adu07g01145 07 16817784 16819497 PCT