LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu07g01138	ATGAATCTTTCAAAGTGTGAAGTTGTTCTGTTCTTGTGGTTTTGCTGCTATTTGCTATTGGCTACTGCTCAGAATGGAGTCACTCACCCCAATGAAGTTAAGGCGTTGAGAGCCATAAAGAACAATTTGATTGATGTCAATAGAAATTTGAGTAATTGGAATCAAGGAGATCCATGTATTAATAGATGGACAGGGGTTTTGTGTCACGACAGAAGATTTAACGATGGATATTTTCATGTTCGGGAACTGCAACTATTGAGAATGAACTTGTCTGGAAAATTGGCACCGGAGATTGGCAACTTCACTTATCTGGAAATATTGGATTTTATGTGGAACAAGATAAGTGGGACCATACCAAAAGAAATTGGCAACATCATTACCCTGAAACTCTTGCTCCTGAATGGAAATAAATTAATTGGTCCACTGCCAGAAGAGCTTGGCTATTTACCAAACTTGATCCGAATGCAAATTGATCAGAACAATATCAATGGATCTATACCTTCATCATTTGCAAACCTCAATGCCTGCAAGCACTTTCACATGAACAATAATTCACTTAGCGGCCCTATCCCGCCGGAGCTTTCCCAACTACCAAACCTTTTTCACCTGCTTCTTGACACAAACAACTTAACAGGAACACTTCCCCCTGATCTCTCTAAGATGCCACGCTTAAAGATTCTGCAGCTTGATAACAATAACTTTAGTGGAAGTACTATTCCCGAGTCTTATGGAGATATGTCACGTTTGTTCAAACTGAGCCTTAGGAACTGCAACTTGAAAGGACCAATTCCTGATTTGAGTAGGATACCAAACCTTTATTATATTGATCTCAGTCACAATCAGCTGAATGAAACAATTCCTACAAATCAGCTTTCTGGGAATATCACAACCATTGTGTTATCAAACAACAATCTCAGTGGAACTATTCCATTAAATTTTTCAAATCTTCCACGTCTTAAGAAATTATCAATTGCAAACAATAAATTGAGTGGCAACGTTCCCTCCTCCATTTGGCAGAACAAGACTTCAAGTGCAAATGAAAGCCTTATTGTGGACTTGCAAAACAATGAGCTCAACACCATATCAGGAAGTACTACTCTTCCTTCAAATGTCACACTCCAGTATGTTTTTCCTGCAACTGTTAACAACACCACAACTAATCAGAAGTTCAATGATAGCGAGTATTCGCGGATTAGAAGCACGTTGACAGGGTGGAATATTAGTGACAGTGACTTGTTTGGGCCTTATGAACTTATGGATCTTCCTGCTTATAGTCAGGTGATTGTGGTGTCTTCAGGTTCAGGGCTAAGCAAAGGTGCACTGGCTGGAATAATCTTAGGTTCAATTGCGGTAGCAGTTACATTATCTGCAATTGTTTCCCTTCTTATATTGAGAATCAGATTGAGAGATTACCGTATACTTTCCAAACGGCAACATGGAACAAGGATCTCAATAAAAATTGAAGGTGTGAGGGTATTTGTTTTTGAAGAGTTGGCAGCAGCAACTAATAATTTCAGTGAGTCTTCTCAAGTTGGACGCGGCGGGTATGGGAAGGTTTATAAAGGTATTCTTGCTGACGGCACTGCTGTCGCCATAAAACGTGCACAGGAAGGATCACTGCAAGGTGAGAGGGAGTTTCTTACAGAAATACAGTTGCTGTCGCGCCTGCATCACCGAAACCTTGTGTCTCTAATTGGATATTGTGATGAAGAGGGTGAACAGATGCTGGTTTACGAATATATGCCGAACGGAACGCTAAGGGATCACCTCTCGCCTTATTCAAGAACACCTCTGAATTTTACAATGAGAATGAAGATTGCTCTAGGATCAGCTAAAGGTCTTTTGTATCTACACACAGAAGCTGATCCTCCAATATTCCACAGAGATGTCAAGGCCAGTAATATACTATTGGACTCTAAGTTCAATGCAAAGGTTGCTGATTTTGGACTTTCGCGACTCGCCCCGGTGCCAGATGTCGAAGGAGTTGTGCCTGGTCATGTATCTACAGTGGTAAAAGGGACCCCGGGTTACCTTGATCCGGAGTATTTCTTAACTCGCAAGTTAACAGACAAGAGTGATGTTTATAGTCTTGGTGTCGTTACTTCGGATTACCAATCCGGCGGTCTAGTTGCAGTTATGGATGAACGCTTGGGGCCTTGTCCTTCAGAATGTGTGCAACCATTTTTGACATTGGCTCTAAAGTGTTGCGAAGACGTGCCAGACGATAGGCCTAAGATGGCAGAAGTGGTTAGAGAGCTTGAAAACATTTGGTCCATGATTCCTGAGTCTAATGGCAAAGTAGCTGAATATGTTAGCAGTGATTCAGGAACATTATTCAGTTCACAACCTTCATCATCCATCCCTTTTGCATCCGTAGAAATTTCTGGCAGTGATCTTATTAGTGGAGATATTCCAACCATCAAGCCAAGATAA	2433	0.4114	MNLSKCEVVLFLWFCCYLLLATAQNGVTHPNEVKALRAIKNNLIDVNRNLSNWNQGDPCINRWTGVLCHDRRFNDGYFHVRELQLLRMNLSGKLAPEIGNFTYLEILDFMWNKISGTIPKEIGNIITLKLLLLNGNKLIGPLPEELGYLPNLIRMQIDQNNINGSIPSSFANLNACKHFHMNNNSLSGPIPPELSQLPNLFHLLLDTNNLTGTLPPDLSKMPRLKILQLDNNNFSGSTIPESYGDMSRLFKLSLRNCNLKGPIPDLSRIPNLYYIDLSHNQLNETIPTNQLSGNITTIVLSNNNLSGTIPLNFSNLPRLKKLSIANNKLSGNVPSSIWQNKTSSANESLIVDLQNNELNTISGSTTLPSNVTLQYVFPATVNNTTTNQKFNDSEYSRIRSTLTGWNISDSDLFGPYELMDLPAYSQVIVVSSGSGLSKGALAGIILGSIAVAVTLSAIVSLLILRIRLRDYRILSKRQHGTRISIKIEGVRVFVFEELAAATNNFSESSQVGRGGYGKVYKGILADGTAVAIKRAQEGSLQGEREFLTEIQLLSRLHHRNLVSLIGYCDEEGEQMLVYEYMPNGTLRDHLSPYSRTPLNFTMRMKIALGSAKGLLYLHTEADPPIFHRDVKASNILLDSKFNAKVADFGLSRLAPVPDVEGVVPGHVSTVVKGTPGYLDPEYFLTRKLTDKSDVYSLGVVTSDYQSGGLVAVMDERLGPCPSECVQPFLTLALKCCEDVPDDRPKMAEVVRELENIWSMIPESNGKVAEYVSSDSGTLFSSQPSSSIPFASVEISGSDLISGDIPTIKPR	810

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu07g01138	810	Pfam	Leucine rich repeat N-terminal domain	30	68	IPR013210	-
	Adu07g01138	810	PANTHER	LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN	7	374	-	-
	Adu07g01138	810	CDD	STKc_IRAK	511	756	-	-
	Adu07g01138	810	ProSiteProfiles	Protein kinase domain profile.	505	758	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu07g01138	810	SUPERFAMILY	L domain-like	44	375	-	-
	Adu07g01138	810	Gene3D	Ribonuclease Inhibitor	27	293	IPR032675	-
	Adu07g01138	810	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	7	374	-	-
	Adu07g01138	810	Pfam	Protein tyrosine and serine/threonine kinase	508	753	IPR001245	GO:0004672\|GO:0006468
	Adu07g01138	810	PANTHER	LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN	376	700	-	-
	Adu07g01138	810	SUPERFAMILY	Protein kinase-like (PK-like)	490	776	IPR011009	-
	Adu07g01138	810	Gene3D	Ribonuclease Inhibitor	294	374	IPR032675	-
	Adu07g01138	810	PANTHER	LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN	703	784	-	-
	Adu07g01138	810	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	703	784	-	-
	Adu07g01138	810	Gene3D	Phosphorylase Kinase; domain 1	475	580	-	-
	Adu07g01138	810	ProSitePatterns	Protein kinases ATP-binding region signature.	511	533	IPR017441	GO:0005524
	Adu07g01138	810	Gene3D	Transferase(Phosphotransferase) domain 1	581	770	-	-
	Adu07g01138	810	SMART	serkin_6	505	758	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu07g01138	810	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	625	637	IPR008271	GO:0004672\|GO:0006468
	Adu07g01138	810	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	376	700	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu07g01138	Adu-Chr7	16558718	16565498	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu07g01138	90	810	Receptor kinase-like Gene Family	AT5G37450	38.925	1.03e-143	440

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VIII-1	Adu07g01138		PK_Tyr_Ser-Thr	2.4e-40	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu07g01138	-		-	gmx:100777308	782.326