Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01097 ATGTTTGGAATTGAGGGGAAGTTAGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTATTCGTCGACAGGGAGAATGATATTCTTCTCCTTGGGGACGATCCATGGGAATCATTTGTCAACAATGTTTGGTATATCAAAATACTTTCACCTGAGGATATTCAGAAGATGGGAGAACAAGCCGTAGAATCTCGTGACGGTGTTCCTGGCCTACCATCGATAGGCGAATACTGA 231 0.4459 MFGIEGKLEDPLRSGWQLVFVDRENDILLLGDDPWESFVNNVWYIKILSPEDIQKMGEQAVESRDGVPGLPSIGEY 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01097 76 PANTHER AUXIN RESPONSE FACTOR 1 64 - -
Adu07g01097 76 Pfam AUX/IAA family 14 53 IPR033389 -
Adu07g01097 76 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 64 IPR044835 GO:0003677|GO:0006355|GO:0009725
Adu07g01097 76 ProSiteProfiles PB1 domain profile. 1 52 IPR000270 GO:0005515
Adu07g01097 76 Gene3D - 1 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01097 Adu-Chr7 15661369 15662163 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01097 1 72 B3 DNA Binding Superfamily AT5G37020 75.000 6.61e-33 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Adu07g01097 AUX_IAA 6.7e-06 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01097 - - adu:107458034 161.384