Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01055 ATGTCTTTCTCTTTGATGGAAGTATGCAAGAAGAGAAGGCGGTGCCCAAAGATCTTCAGCTTCCAGTCCTTCGCCGATCCCGGGTGCCCCGTCGCTCCCTCCGCCGCCTTCCGCGACAACGTCAGATCGTTCCTCCGAGAGTGCGCGGAGCTCGAGGAGTACGTCGTTCAGAACAGCCCACTCTGGTGCACCCTTTTGCTCAGCGACAAGACCAACGTCATGGCACCTCTCTACACCCTCGAAGAACAAGTTTGCCAATCTTCCCACCCCTTCTGCGACCATTGCCGCTGTGCAGGTTGGAGTGGTCACTTTGTGTCAAAGAGAAGGTATCATTTCATAATTCCAATGGACAATTGGTGGAATAAACCCTTACCTGAGGATGCTATTGATAATCAGGACCATCTCTTGCATGGTGTGATTCACTGCAATGGCTATGGCCATTTGGTCTGCATTAATGGCATTGAAGGTGGCTCCAAGGTCCTCAGTGGTAGAGAGATCATGGATCTATGGGATAGGATCTGCACAAACCTTGGAGCAAGGAAAATTTCAGTGGAAGATGTTTCAAGGAAGCGATCCATGGATCTTCGCCTACTTCATGGTGTTGCATATGGCCACTCATGGTTTGGTAGGTGGGGCTACAAGTTTTGTCGCGGAAGCTTTGGAGTGACAGGCCAAACCTACTATGAAGCAATTGAAGGTCTAGGTTCCTTAGAGCTTGATGAAATAGTGAGAGATTTAAGCAAGACAAAGTGCCATAAAGAGATCAAGCAAATCATTCGCAGCTATAGAGACATGAGTGAAACTCAGATTACCACATTGAGAGATCTTCTAAGGTTCATGCTCACTGTCAAGTCTCGCGTCCCAATGTCCAAGATATCAATAACCCTTGGAGCTCCTCCTTCTTCGGCTTTCATCTCAAGAAATTCAACCAAACAAGGCTTCTTAAGTAGATCAAATCTGGCAAAGGAGAAGTCCGCAAAGTACAAGAAATTCAGCACCGCAGTGGCTAATATGGATAGCAGGTGGCCAACAAGGAGGCTAGAGTTTGCTGCACAGGTGATTGTTGATGCACTGAAGGAGCACAAGGCAATGAACTCGGCTTCAGAGGGGATGACGCGGCAGGATGTGAGGGATGCATCTAGGCTTCATATTGGTGATACCGGCTTGCTCGATTATGTGCTGAAATCACTCAACAATGTGATTGTTGGCAACTATGTTGTTCGCCGCATGGTTAACCCCTCAACAAGGATCCTAGAATACACCATTCATGAGGTTGGCAATGGGTTTAAGTCGCCGGAAACTGTGGTTGAGCCTGAGGCAGCGGCTCTTGTAGACCCTCAAGATGAGCCATTTAGGATGCCTGGTAGTGATGTTTATTGTGATGTGTTCTACCTATACAAAAATGTGCTACTGAGATATCCGAATTCAGAACCAGTGGACTTAGCAATTCAGACGATCCTTGATAGCCGGTATTTTGTGAAGGAATGGGATTACATGGATGAGATGCAGCAGGCTTTGACATTCATCTGCCGGCTTAAGCCGAATTTCGTTGATATTAAAGCTGATTTGAGTAGGGAGCAGCCTTGTGGGGAGATTGTGATGGTTCCCCTGCATGCAACGGTTAGAGACCTGAAGCAAGCTGCAGAGGCAGCACTGAGGGATACCTACTGCATTGCAGAGAGGCTCATAGTCACTGAGATCACTGAATTGAATGGTGCAAGTGATAATGAGGTGCTATTTGGATTAATCCAATCCGGAGTGGAGCTTTCTGTGAGGGGGATTTCCATTGACTTGTGCACTCCATTGAAGTTCCAAGGTGAATCCGACAATTGGAAGGTGAGGTGTGAGTGTGGAGCACAAGACGACGATGGTGAGAGAATGGTGGCCTGCGACATATGTGAGGTCTGGCAGCACACAAGGTGTTGTGGCATTGAGGATTCTGAGACAGTGCCACCTTTGTTTGTGTGCTCCGGCTGCTGCGATTCGCTTGCCCCTCGGCAGATGGAGTCTCCCTTTGCCATGGATTGTGTTGATGATTTTCTTGTTTCACCAGAGCCTACCTTGTTTCTGGAATATGAATGTGGTTACTGA 2091 0.4787 MSFSLMEVCKKRRRCPKIFSFQSFADPGCPVAPSAAFRDNVRSFLRECAELEEYVVQNSPLWCTLLLSDKTNVMAPLYTLEEQVCQSSHPFCDHCRCAGWSGHFVSKRRYHFIIPMDNWWNKPLPEDAIDNQDHLLHGVIHCNGYGHLVCINGIEGGSKVLSGREIMDLWDRICTNLGARKISVEDVSRKRSMDLRLLHGVAYGHSWFGRWGYKFCRGSFGVTGQTYYEAIEGLGSLELDEIVRDLSKTKCHKEIKQIIRSYRDMSETQITTLRDLLRFMLTVKSRVPMSKISITLGAPPSSAFISRNSTKQGFLSRSNLAKEKSAKYKKFSTAVANMDSRWPTRRLEFAAQVIVDALKEHKAMNSASEGMTRQDVRDASRLHIGDTGLLDYVLKSLNNVIVGNYVVRRMVNPSTRILEYTIHEVGNGFKSPETVVEPEAAALVDPQDEPFRMPGSDVYCDVFYLYKNVLLRYPNSEPVDLAIQTILDSRYFVKEWDYMDEMQQALTFICRLKPNFVDIKADLSREQPCGEIVMVPLHATVRDLKQAAEAALRDTYCIAERLIVTEITELNGASDNEVLFGLIQSGVELSVRGISIDLCTPLKFQGESDNWKVRCECGAQDDDGERMVACDICEVWQHTRCCGIEDSETVPPLFVCSGCCDSLAPRQMESPFAMDCVDDFLVSPEPTLFLEYECGY 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01055 696 SMART PHD_3 614 660 IPR001965 -
Adu07g01055 696 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 10 668 - -
Adu07g01055 696 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 602 664 IPR013083 -
Adu07g01055 696 ProSitePatterns Zinc finger PHD-type signature. 615 659 IPR019786 -
Adu07g01055 696 SUPERFAMILY FYVE/PHD zinc finger 606 665 IPR011011 -
Adu07g01055 696 CDD PHD_MMD1_like 615 659 - -
Adu07g01055 696 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 10 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01055 Adu-Chr7 14816869 14819843 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01055 7 665 PHD Transcription Factor Family AT5G22260 31.927 3.07e-118 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01055 - - mtr:MTR_5g077750 1039.64