Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01054 ATGGTGTTGCCTCAATCGACATGCAATCTCATGTCAGCAAAGAATAAGCAAGTGGCCCAACCTGAAATCCAGAAGCCTAGATGGCTTGATGCTTTCCTGAGAAACAAGTTTTTTGAGCAGTGCAAGGATCATCCAGAGCGCAAGAATGAGTTGAACAAATACTGTATAGACTGTGATCAGGCAGTTTGCCAGTATTGCATTTCATTAGGTCATCAAGACCACATCACACTTAAGGTCTACAGACATGTTTACAAAGATGTTGTCTCCATTGGTACTATGGATAAGTATATTGACTGCTCAGAAATTCAGCGCTACAAATCCAACAAGCGATTGGTTATTTCTCTGAATCCTCTCCCGCACAGTGGTTCGACATCCAACAATGAGGCATCATGCAATACCTGCACTAGAAAGTTGAATGAACCGAATCTATATCGCTACTGCTCCATTTCTTGCAAGGTCAAGGCTATTTCGCTAGAACCTAATGATTTGGTTCCTGCCGTAATTCCTGACCAGAACCACAATGCTCCTCAGGAAGGACCGGATATTCCTACTCAGGAAAGACCAGAGGCAAATGCCGAACTCCCAAGGCCAAGAAAGAGAAGAAGAAAGGGAACACCACATCGAGCTCCATTCTTCTAA 639 0.4366 MVLPQSTCNLMSAKNKQVAQPEIQKPRWLDAFLRNKFFEQCKDHPERKNELNKYCIDCDQAVCQYCISLGHQDHITLKVYRHVYKDVVSIGTMDKYIDCSEIQRYKSNKRLVISLNPLPHSGSTSNNEASCNTCTRKLNEPNLYRYCSISCKVKAISLEPNDLVPAVIPDQNHNAPQEGPDIPTQERPEANAELPRPRKRRRKGTPHRAPFF 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01054 212 MobiDBLite consensus disorder prediction 197 212 - -
Adu07g01054 212 Pfam PLATZ transcription factor 81 153 IPR006734 -
Adu07g01054 212 CDD Bbox2 41 79 - -
Adu07g01054 212 PANTHER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 11 212 - -
Adu07g01054 212 SUPERFAMILY B-box zinc-binding domain 38 79 - -
Adu07g01054 212 MobiDBLite consensus disorder prediction 167 212 - -
Adu07g01054 212 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 11 212 - -
Adu07g01054 212 ProSiteProfiles Zinc finger B-box type profile. 41 79 IPR000315 GO:0008270
Adu07g01054 212 Gene3D Classic Zinc Finger 34 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01054 Adu-Chr7 14812995 14815781 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Adu07g01054 PLATZ 9.6e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01054 - - adu:107457969 438.728