Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01025 ATGGACAAAGTTCATATTGGGCAGCTAGCTTTTCTTGTGGACATAATTTTGCAGTTCTTTCTTGCTTATAGAGATAGTCAGACCTATCGCATGGTCTACAAGCGTACCCCTATTGCTTTGCGGTACCTAAAAACTGACTTCATCTTTGATTTTCTTGGATGTATGCCTTGGGATATCATATTCAAGGTTTGTGGACACAGAGAAGAAGTTAGGTACCTCTTGTGGATCAGATTATATCGGGTGCGGAAAGTCACCGAATTTTTCCATAATTTGGAGAAGGATATACGTGTTAATTACATCATTACTCGGATTGTGAAACTTTTAGTAGTTGAACTCTACTGCACCCACACTGCAGCCTGCATTTTCTACTATTTGGCTACTACACTTCCTGAATCTCAAGAAGAGTACACATGGATTGGAAGTTTACAGCTTGGTGGTTATAGTTATCAACATTTCAGAGAAATTGATCTTTGGAAGCGCTATACAACATCCTTGTATTTTGCTATCGTTACTATGGCTACTGTCGGTAAGTTAGTTATTGTAGAGTTACGGTTGAGTTGTTTTCATATAACTTTGTTTGTGACTTTCTTTTCTTCCACAGGCTATGGAGATATACATGCAGTAAACTTGAGGGAGATGATATTCATAATGATATATGTCTCATTTGATATGGTTCTTGGTGCTTATTTGATCGGTAACATGACAGCTTTGATAGTCAAGGGATCAAAAACTGAGAAATTTAGGGACAAGATGACAGATCTTATGAAATATATGAATAGAAATAGACTTGGACGGGATATCCGTGAACAAATAAAAGGCCATCTGCGCTTACAGTTTGAGAGTAGCTATACCGAGGCTGCCGTCCTTCAGGAAATTCCCATTTCTATTCGCTCTAAGATATCTCAAACATTATACTTGCCATGCATTCAAATGGTTCCTCTTTTTAAGGGCTGTTCTTCAGAATTCATCAATCAGATAGTTACCAGGCTCCACGAGGAATTTTTTCTTCCAGGAGAGGTTATCATGGAACAAGGAAATGTCGTGGATCAACTATATTTTGTCTGTCATGGTGTGCTGGAGTTAGTAGGCACTGCTGAGGATGGGACTGAAGAAACTGTTTCACTTCTGGAACCTAACAGTTCATTTGGAGAGATATCCATTCTTTGCAACATTCCTCAACCATATACTGTTCGTGTCTGCGAACTCTGTAGGCTCCTGAGGCTTGATAAACAATCGTTTACAAATATCCTTGATATATACTTTTATGATGGAAGGAAGATATTAAACAACCTTCTTGAGGGAAAAGAGACTTCTCGTGGTAAGCAATTAGAGTCAGACATCACATTTCATATTGGAAAGCAAGAAGCTGAACTTGCTTTGAAGGTCAACAGTGCAGCTTTCAATGGGGATCTGTATCAGCTAAAAGGTTTAGTTAGAGCTGGAGCTGATCCCAACAAGACAGATTACGATGGAAGATCACCTTTGGTGAGGAGCTTGCAACATTTCAAATGTCTTGTATGTTTTGGCAATGCTTGTCTCACACGTTTTTTCTTCCAACAGCATCTTGCTGCATCCAGAGGCTACGAAGACATCACACTTTTCCTTATTCAAGAAGGCGTAGACATCAATGTTAGCGATAATTTTGGGAACACACCCTTACTTGAAGCAGTTAAGAGTGGACATGATCGTGTTGCTTCTTTACTTGTTAGAGAAGGAGCCGCCATGAAGATAGAAGATGGCGGTAGTTTTCTATGCACAGCAGTTGCAAGGGGAGATTCAGATTATCTTAAAAGGCTACTGTCTAATGGCATGGATCCCAACTTGAAAGATTATGATTACCGAAGCCCTTTGCACGTTGCTGCAGCTGAAGGTTTATACTTCATGGCAAAGTTGCTATTAGAAGCTGGAGCCAGTGTTTTTACCAAGGACAGATGGGGAAAAACCCCACTTGATGAAGCTCGAATGAGTGGAAATAAGAACCTAATCAAACTACTAGAAGATGCAAAATCTGCTCAGTTGTCAGAATTGCTATGTCCCGCACAAGAACTTACAGATAAAATGCATCCACAGAAATGTACAGTGTTCCCTTTCCACCCATGGGATCCAAAAGATCATACAAAACATGGCATTGTATTATGGATCCCACATACTATTGAAGAGCTAATCAAAATGGCAGCGGATCAATTTGAGTTTCCTAGTGATTCTTGTGTTTTTATTTTATCAGAAGATGCTGGTAAAATTACTGATGTGGACATGATTAAAGATGAGAAGAGTGTTGTCTTGACTAATGTAGCCAAGATTAATGAGAGCACTCTAAGACAGATGGGAAGAGATCCGGATGCCCAACAACCTCAGGCTCAAGGGCAACCACAAGACCAGGTGCAAGAACAAACAGAGCCAACCCCCACCACCACCCCTCCTTCGCCAACAATGCAAGATTTGATGGAAGAATTGCGAAGCATGAGAGTATATATGGAGGAGCAATTTGCTGATATGAGGCAGCGTCAACGTATACAAAATTAG 2523 0.4019 MDKVHIGQLAFLVDIILQFFLAYRDSQTYRMVYKRTPIALRYLKTDFIFDFLGCMPWDIIFKVCGHREEVRYLLWIRLYRVRKVTEFFHNLEKDIRVNYIITRIVKLLVVELYCTHTAACIFYYLATTLPESQEEYTWIGSLQLGGYSYQHFREIDLWKRYTTSLYFAIVTMATVGKLVIVELRLSCFHITLFVTFFSSTGYGDIHAVNLREMIFIMIYVSFDMVLGAYLIGNMTALIVKGSKTEKFRDKMTDLMKYMNRNRLGRDIREQIKGHLRLQFESSYTEAAVLQEIPISIRSKISQTLYLPCIQMVPLFKGCSSEFINQIVTRLHEEFFLPGEVIMEQGNVVDQLYFVCHGVLELVGTAEDGTEETVSLLEPNSSFGEISILCNIPQPYTVRVCELCRLLRLDKQSFTNILDIYFYDGRKILNNLLEGKETSRGKQLESDITFHIGKQEAELALKVNSAAFNGDLYQLKGLVRAGADPNKTDYDGRSPLVRSLQHFKCLVCFGNACLTRFFFQQHLAASRGYEDITLFLIQEGVDINVSDNFGNTPLLEAVKSGHDRVASLLVREGAAMKIEDGGSFLCTAVARGDSDYLKRLLSNGMDPNLKDYDYRSPLHVAAAEGLYFMAKLLLEAGASVFTKDRWGKTPLDEARMSGNKNLIKLLEDAKSAQLSELLCPAQELTDKMHPQKCTVFPFHPWDPKDHTKHGIVLWIPHTIEELIKMAADQFEFPSDSCVFILSEDAGKITDVDMIKDEKSVVLTNVAKINESTLRQMGRDPDAQQPQAQGQPQDQVQEQTEPTPTTTPPSPTMQDLMEELRSMRVYMEEQFADMRQRQRIQN 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01025 840 PANTHER POTASSIUM CHANNEL SKOR-LIKE 6 195 - -
Adu07g01025 840 Pfam Cyclic nucleotide-binding domain 334 418 IPR000595 -
Adu07g01025 840 ProSiteProfiles Ankyrin repeat profile. 548 580 IPR002110 GO:0005515
Adu07g01025 840 Gene3D - 447 578 IPR036770 -
Adu07g01025 840 SUPERFAMILY Voltage-gated potassium channels 76 274 - -
Adu07g01025 840 Pfam Ion transport protein 10 239 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Adu07g01025 840 SUPERFAMILY Ankyrin repeat 465 668 IPR036770 -
Adu07g01025 840 Pfam KHA, dimerisation domain of potassium ion channel 691 757 IPR021789 -
Adu07g01025 840 MobiDBLite consensus disorder prediction 774 812 - -
Adu07g01025 840 Pfam Ankyrin repeats (3 copies) 521 610 IPR002110 GO:0005515
Adu07g01025 840 ProSiteProfiles Ankyrin repeat region circular profile. 548 579 - -
Adu07g01025 840 Gene3D Helix hairpin bin 241 297 - -
Adu07g01025 840 ProSiteProfiles KHA domain profile. 691 779 IPR021789 -
Adu07g01025 840 CDD CAP_ED 314 428 IPR000595 -
Adu07g01025 840 Pfam Ankyrin repeats (many copies) 613 665 IPR002110 GO:0005515
Adu07g01025 840 ProSiteProfiles Ankyrin repeat region circular profile. 612 644 - -
Adu07g01025 840 MobiDBLite consensus disorder prediction 774 801 - -
Adu07g01025 840 ProSiteProfiles Ankyrin repeat profile. 612 644 IPR002110 GO:0005515
Adu07g01025 840 PANTHER POTASSIUM CHANNEL SKOR-LIKE 196 496 - -
Adu07g01025 840 ProSiteProfiles Ankyrin repeat region circular profile. 579 610 - -
Adu07g01025 840 ProSiteProfiles Ankyrin repeat profile. 579 611 IPR002110 GO:0005515
Adu07g01025 840 Gene3D Jelly Rolls 298 436 IPR014710 -
Adu07g01025 840 ProSiteProfiles cAMP/cGMP binding motif profile. 314 434 IPR000595 -
Adu07g01025 840 PANTHER POTASSIUM CHANNEL AKT1 6 195 IPR045319 GO:0005249|GO:0006813
Adu07g01025 840 PANTHER POTASSIUM CHANNEL AKT1 520 761 IPR045319 GO:0005249|GO:0006813
Adu07g01025 840 SUPERFAMILY cAMP-binding domain-like 242 432 IPR018490 -
Adu07g01025 840 Gene3D - 6 240 - -
Adu07g01025 840 PANTHER POTASSIUM CHANNEL AKT1 196 496 IPR045319 GO:0005249|GO:0006813
Adu07g01025 840 PANTHER POTASSIUM CHANNEL SKOR-LIKE 520 761 - -
Adu07g01025 840 Gene3D - 579 675 IPR036770 -
Adu07g01025 840 ProSiteProfiles Ankyrin repeat profile. 521 547 IPR002110 GO:0005515
Adu07g01025 840 SMART ANK_2a 548 577 IPR002110 GO:0005515
Adu07g01025 840 SMART ANK_2a 645 675 IPR002110 GO:0005515
Adu07g01025 840 SMART ANK_2a 612 641 IPR002110 GO:0005515
Adu07g01025 840 SMART ANK_2a 579 608 IPR002110 GO:0005515
Adu07g01025 840 SMART ANK_2a 515 544 IPR002110 GO:0005515
Adu07g01025 840 SMART cnmp_10 314 432 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01025 Adu-Chr7 14228035 14233986 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01025 586 665 Ion Channels AT5G37500 35.294 1.49e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01025 K21867 - gmx:100814385 1240.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g01025 07 14228035 14233986 Adu07g01025 07 14228035 14233986 ECH