Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01002 ATGGGAAGGCAACCATGTTGTGACAAAGTTGGGTTGAAGAAGGGACCATGGACAGCAGAAGAGGACAAGAAGCTCATAAGCTTCCTCCTCACTAATGGCCAATGTTGTTGGAGAGCTGTGCCTAAGCTTGCAGGGCTATTAAGATGTGGAAAAAGTTGCAGGTTAAGGTGGACAAATTATCTTAGGCCAGACTTAAAGAGAGGCCTTCTTTCAGATTATGAGGAGAAAATGGTCATTGACCTTCATGCTCAACTTGGAAACAGATGGTCGAAAATTGCTTCTCATCTGCCAGGAAGAACAGATAATGAGATTAAAAACCATTGGAACACTCACATTAAGAAAAAGCTGAAGAAAATGGGCATTGACCCTGTTACTCACAAGCCACTCTCCAATAATCAACAAATTCAAGAACAGAGCAACCAAACACCTCCTCACAATGTTGACTTTGACCCCAACCATGATGAACTACCTAAAACTCAAGACCAAAACAATCCTAAAGAGGAAGAGAAACCAGATACCATTACTGAGTCCAAAGAAAGAGAAGAGAAAATGGTTATGATGATGCCACCACCCTTAATTGATGACACAATAATAATGGATGATGAGATTATTATAATCAATGATATCAATGGGTTCTGCACTGATGAGGTACCAATAATAGAACCACATGAGATTCTTGTTCCTTCTTCTGATCCTTCTCCTTCGTCTTCATCATCGTCCTCGTCGTCTTCTTCTTCTTCTTTTAGTTCAAGTAATAACTTCCTTGAAGACCTTCAGCTCCCGGATTTTGAATGGTGTTGTAACAATGATCATAATGATATTATTATTAACAACAACGACAATAATGTGGCTTCGTGGAATGATGATGATTTTATTAACTGCTTGAACTCTCTGATAAATGATGATAATGATGATCATGATCGTGATCATGATAATGGTGAAAGTAGCAAGCAGCAAGAACTAGTGTTTGATGATAATGCTCCATCTTCTTCTCCACTTTCTCAGTACTCAAACATGGTCATGGATTATTCAGAATCTTCTTGGCCATATGGCTTCTTTTGA 1062 0.3889 MGRQPCCDKVGLKKGPWTAEEDKKLISFLLTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSDYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMGIDPVTHKPLSNNQQIQEQSNQTPPHNVDFDPNHDELPKTQDQNNPKEEEKPDTITESKEREEKMVMMMPPPLIDDTIIMDDEIIIINDINGFCTDEVPIIEPHEILVPSSDPSPSSSSSSSSSSSSSFSSSNNFLEDLQLPDFEWCCNNDHNDIIINNNDNNVASWNDDDFINCLNSLINDDNDDHDRDHDNGESSKQQELVFDDNAPSSSPLSQYSNMVMDYSESSWPYGFF 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01002 353 MobiDBLite consensus disorder prediction 225 251 - -
Adu07g01002 353 SMART sant 66 114 IPR001005 -
Adu07g01002 353 SMART sant 13 63 IPR001005 -
Adu07g01002 353 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Adu07g01002 353 MobiDBLite consensus disorder prediction 122 186 - -
Adu07g01002 353 CDD SANT 16 61 IPR001005 -
Adu07g01002 353 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Adu07g01002 353 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Adu07g01002 353 PANTHER MYB TRANSCRIPTION FACTOR 1 294 - -
Adu07g01002 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Adu07g01002 353 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 294 - -
Adu07g01002 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Adu07g01002 353 MobiDBLite consensus disorder prediction 304 318 - -
Adu07g01002 353 MobiDBLite consensus disorder prediction 148 185 - -
Adu07g01002 353 MobiDBLite consensus disorder prediction 319 335 - -
Adu07g01002 353 CDD SANT 74 112 IPR001005 -
Adu07g01002 353 MobiDBLite consensus disorder prediction 229 251 - -
Adu07g01002 353 MobiDBLite consensus disorder prediction 126 147 - -
Adu07g01002 353 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Adu07g01002 353 Pfam Myb-like DNA-binding domain 74 111 IPR001005 -
Adu07g01002 353 Gene3D - 11 67 - -
Adu07g01002 353 Gene3D - 71 146 - -
Adu07g01002 353 MobiDBLite consensus disorder prediction 304 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01002 Adu-Chr7 13776412 13779042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g01002 1 227 MYB Transcription Factor Family AT5G16600 63.877 9.53e-96 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu07g01002 Myb_DNA-binding 2.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01002 K09422 - gmx:100792103 355.14